RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 PRLP01236 227 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 CPOXP36551 454 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 BLVRAP53004 296 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 GNG2P59768 71 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 TWF1Q12792 350 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 C1DQ13901 141 aaKnown RBP13.21□□□□□ -0.29
COL2A1-201ENST00000337299 PIGGQ5H8A4 983 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 C1orf220Q5T0J3 134 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 ZPBP2Q6X784 338 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 ANKRD13BQ86YJ7 626 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 SYT11Q9BT88 431 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 PCDHGA10Q9Y5H3 936 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 E7ESA3 106 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 PLOD2O00469 737 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 SNNO75324 88 aaPredicted RBP13.21□□□□□ -0.29
COL2A1-201ENST00000337299 CTSHP09668 335 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 IDO1P14902 403 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 AQP1P29972 269 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 MAXP61244 160 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 CAPSQ13938 189 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 DCAF4L1Q3SXM0 396 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 TIMM50Q3ZCQ8 353 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 PAN2Q504Q3 1202 aaKnown RBP13.21□□□□□ -0.29
COL2A1-201ENST00000337299 SULT1C3Q6IMI6 304 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 ESRP1Q6NXG1 681 aaKnown RBP13.21□□□□□ -0.29
COL2A1-201ENST00000337299 FBXO16Q8IX29 292 aaPredicted RBP13.21□□□□□ -0.29
COL2A1-201ENST00000337299 P2RX7Q99572 595 aaKnown RBP13.21□□□□□ -0.29
COL2A1-201ENST00000337299 ELOVL4Q9GZR5 314 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 PORCNQ9H237 461 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 CATSPERBQ9H7T0 1116 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 DTLQ9NZJ0 730 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 TRHDEQ9UKU6 1024 aa13.21□□□□□ -0.29
COL2A1-201ENST00000337299 MRPS7Q9Y2R9 242 aaKnown RBP13.21□□□□□ -0.29
COL2A1-201ENST00000337299 ABCB7O75027 752 aa13.21□□□□□ -0.3
COL2A1-201ENST00000337299 EPN2O95208 641 aa13.21□□□□□ -0.3
COL2A1-201ENST00000337299 MLNP12872 115 aa13.21□□□□□ -0.3
COL2A1-201ENST00000337299 GSK3BP49841 420 aa13.21□□□□□ -0.3
COL2A1-201ENST00000337299 KIAA0408Q6ZU52 694 aa13.21□□□□□ -0.3
COL2A1-201ENST00000337299 SCML4Q8N228 414 aa13.21□□□□□ -0.3
COL2A1-201ENST00000337299 CENPIQ92674 756 aaPredicted RBP13.21□□□□□ -0.3
COL2A1-201ENST00000337299 FUNDC2Q9BWH2 189 aa13.21□□□□□ -0.3
COL2A1-201ENST00000337299 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.21□□□□□ -0.3
COL2A1-201ENST00000337299 MALT1Q9UDY8 824 aa13.21□□□□□ -0.3
COL2A1-201ENST00000337299 MAGEL2Q9UJ55 1249 aa13.21□□□□□ -0.3
COL2A1-201ENST00000337299 AQP12BA6NM10 295 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 C5orf58C9J3I9 102 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 SERPINB7O75635 380 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 ENDOD1O94919 500 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 CSF2P04141 144 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 ZNF157P51786 506 aaPredicted RBP13.2□□□□□ -0.3
COL2A1-201ENST00000337299 SLC25A11Q02978 314 aaKnown RBP13.2□□□□□ -0.3
COL2A1-201ENST00000337299 GSTM4Q03013 218 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.2□□□□□ -0.3
COL2A1-201ENST00000337299 DLK2Q6UY11 383 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 SH3BP5LQ7L8J4 393 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 AQP12AQ8IXF9 295 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 CCDC185Q8N715 623 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 OR56A4Q8NGH8 313 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 TMLHEQ9NVH6 421 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 PCDH10Q9P2E7 1040 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 KLQ9UEF7 1012 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 TBC1D30Q9Y2I9 924 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 SLC22A1O15245 554 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 CELF2O95319 508 aaKnown RBP13.2□□□□□ -0.3
COL2A1-201ENST00000337299 SERPINA1P01009 418 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 CXCR3P49682 368 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 TPRG1LQ5T0D9 272 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 NAPRTQ6XQN6 538 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 OR10A6Q8NH74 314 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 KCTD15Q96SI1 283 aaPredicted RBP13.2□□□□□ -0.3
COL2A1-201ENST00000337299 C14orf119Q9NWQ9 140 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 ING3Q9NXR8 418 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 BBIP1A8MTZ0 92 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 AREL1O15033 823 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 NCAM2O15394 837 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 GCATO75600 419 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 SIX3O95343 332 aaPredicted RBP13.2□□□□□ -0.3
COL2A1-201ENST00000337299 GGT5P36269 586 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 HARS2P49590 506 aaKnown RBP13.2□□□□□ -0.3
COL2A1-201ENST00000337299 UGT3A1Q6NUS8 523 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 PMF1Q6P1K2 205 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 BBS7Q8IWZ6 715 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 MINDY2Q8NBR6 621 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 STON2Q8WXE9 905 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 NCSTNQ92542 709 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 RNFT2Q96EX2 444 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 RBM4BQ9BQ04 359 aaKnown RBP13.2□□□□□ -0.3
COL2A1-201ENST00000337299 RBM4Q9BWF3 364 aaKnown RBP13.2□□□□□ -0.3
COL2A1-201ENST00000337299 RMND5AQ9H871 391 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 RIMS3Q9UJD0 308 aa13.2□□□□□ -0.3
COL2A1-201ENST00000337299 DUOX1Q9NRD9 1551 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 SLC2A3P11169 496 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 S100A3P33764 101 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 SF3B4Q15427 424 aaKnown RBP eCLIP13.19□□□□□ -0.3
COL2A1-201ENST00000337299 LY6KQ17RY6 165 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 TEX44Q53QW1 395 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 CCBE1Q6UXH8 406 aaPredicted RBP13.19□□□□□ -0.3
COL2A1-201ENST00000337299 SNX27Q96L92 541 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 VAT1Q99536 393 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 TRIM54Q9BYV2 358 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms