RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 TDRD1Q9BXT4 1180 aaKnown RBP8.82□□□□□ -1
SNCA-201ENST00000336904 TUBB1Q9H4B7 451 aa8.82□□□□□ -1
SNCA-201ENST00000336904 MRM3Q9HC36 420 aaKnown RBP8.82□□□□□ -1
SNCA-201ENST00000336904 SEPT3Q9UH03 358 aa8.82□□□□□ -1
SNCA-201ENST00000336904 EIF2B4Q9UI10 523 aaKnown RBP8.82□□□□□ -1
SNCA-201ENST00000336904 USP22Q9UPT9 525 aa8.82□□□□□ -1
SNCA-201ENST00000336904 SORCS3Q9UPU3 1222 aa8.82□□□□□ -1
SNCA-201ENST00000336904 CPQQ9Y646 472 aa8.82□□□□□ -1
SNCA-201ENST00000336904 F8W8V4 182 aa8.81□□□□□ -1
SNCA-201ENST00000336904 PSMD12O00232 456 aaPredicted RBP8.81□□□□□ -1
SNCA-201ENST00000336904 CRCPO75575 148 aa8.81□□□□□ -1
SNCA-201ENST00000336904 RPLP2P05387 115 aaKnown RBP8.81□□□□□ -1
SNCA-201ENST00000336904 CKMP06732 381 aa8.81□□□□□ -1
SNCA-201ENST00000336904 ZDHHC11BP0C7U3 371 aa8.81□□□□□ -1
SNCA-201ENST00000336904 COL6A2P12110 1019 aa8.81□□□□□ -1
SNCA-201ENST00000336904 FDXRP22570 491 aa8.81□□□□□ -1
SNCA-201ENST00000336904 CTSOP43234 321 aaPredicted RBP8.81□□□□□ -1
SNCA-201ENST00000336904 RHOAP61586 193 aa8.81□□□□□ -1
SNCA-201ENST00000336904 CDH18Q13634 790 aa8.81□□□□□ -1
SNCA-201ENST00000336904 ACAP2Q15057 778 aa8.81□□□□□ -1
SNCA-201ENST00000336904 ZNF423Q2M1K9 1284 aa8.81□□□□□ -1
SNCA-201ENST00000336904 FUT11Q495W5 492 aa8.81□□□□□ -1
SNCA-201ENST00000336904 REP15Q6BDI9 236 aa8.81□□□□□ -1
SNCA-201ENST00000336904 SPRED2Q7Z698 418 aa8.81□□□□□ -1
SNCA-201ENST00000336904 AMIGO2Q86SJ2 522 aa8.81□□□□□ -1
SNCA-201ENST00000336904 TMEM150AQ86TG1 271 aa8.81□□□□□ -1
SNCA-201ENST00000336904 CHD5Q8TDI0 1954 aa8.81□□□□□ -1
SNCA-201ENST00000336904 DDI1Q8WTU0 396 aa8.81□□□□□ -1
SNCA-201ENST00000336904 C19orf60Q96EN9 201 aa8.81□□□□□ -1
SNCA-201ENST00000336904 FEM1CQ96JP0 617 aa8.81□□□□□ -1
SNCA-201ENST00000336904 TEX37Q96LM6 180 aa8.81□□□□□ -1
SNCA-201ENST00000336904 SPTBN5Q9NRC6 3674 aaKnown RBP8.81□□□□□ -1
SNCA-201ENST00000336904 A0A1B0GTW7 788 aa8.81□□□□□ -1
SNCA-201ENST00000336904 TRIM24O15164 1050 aa8.81□□□□□ -1
SNCA-201ENST00000336904 STX7O15400 261 aaKnown RBP8.81□□□□□ -1
SNCA-201ENST00000336904 SMIM24O75264 130 aa8.81□□□□□ -1
SNCA-201ENST00000336904 H2AFYO75367 372 aaKnown RBP8.81□□□□□ -1
SNCA-201ENST00000336904 HLA-DPA1P20036 260 aa8.81□□□□□ -1
SNCA-201ENST00000336904 WEE1P30291 646 aa8.81□□□□□ -1
SNCA-201ENST00000336904 HTR7P34969 479 aa8.81□□□□□ -1
SNCA-201ENST00000336904 GGT5P36269 586 aa8.81□□□□□ -1
SNCA-201ENST00000336904 GDF5P43026 501 aa8.81□□□□□ -1
SNCA-201ENST00000336904 ZNF140P52738 457 aaPredicted RBP8.81□□□□□ -1
SNCA-201ENST00000336904 RBBP7Q16576 425 aa8.81□□□□□ -1
SNCA-201ENST00000336904 FAM45BPQ6NSW5 357 aa8.81□□□□□ -1
SNCA-201ENST00000336904 MBOAT1Q6ZNC8 495 aa8.81□□□□□ -1
SNCA-201ENST00000336904 KIAA0408Q6ZU52 694 aa8.81□□□□□ -1
SNCA-201ENST00000336904 RETREG3Q86VR2 466 aa8.81□□□□□ -1
SNCA-201ENST00000336904 CDYL2Q8N8U2 506 aa8.81□□□□□ -1
SNCA-201ENST00000336904 OR52B6Q8NGF0 335 aa8.81□□□□□ -1
SNCA-201ENST00000336904 FAM45AQ8TCE6 357 aa8.81□□□□□ -1
SNCA-201ENST00000336904 TWIST2Q8WVJ9 160 aa8.81□□□□□ -1
SNCA-201ENST00000336904 LINGO1Q96FE5 620 aa8.81□□□□□ -1
SNCA-201ENST00000336904 TSPAN17Q96FV3 270 aa8.81□□□□□ -1
SNCA-201ENST00000336904 TMEM169Q96HH4 297 aa8.81□□□□□ -1
SNCA-201ENST00000336904 PSKH2Q96QS6 385 aa8.81□□□□□ -1
SNCA-201ENST00000336904 PKP2Q99959 881 aa8.81□□□□□ -1
SNCA-201ENST00000336904 MGME1Q9BQP7 344 aa8.81□□□□□ -1
SNCA-201ENST00000336904 AARSD1Q9BTE6 412 aaKnown RBP8.81□□□□□ -1
SNCA-201ENST00000336904 APOL5Q9BWW9 433 aa8.81□□□□□ -1
SNCA-201ENST00000336904 ZNF385DQ9H6B1 395 aa8.81□□□□□ -1
SNCA-201ENST00000336904 CWH43Q9H720 699 aa8.81□□□□□ -1
SNCA-201ENST00000336904 MTRRQ9UBK8 725 aa8.81□□□□□ -1
SNCA-201ENST00000336904 VPS51Q9UID3 782 aa8.81□□□□□ -1
SNCA-201ENST00000336904 SUFUQ9UMX1 484 aa8.81□□□□□ -1
SNCA-201ENST00000336904 PHF24Q9UPV7 400 aa8.81□□□□□ -1
SNCA-201ENST00000336904 LRCH1Q9Y2L9 728 aa8.81□□□□□ -1
SNCA-201ENST00000336904 PRORSD1PA6NEY8 169 aa8.8□□□□□ -1
SNCA-201ENST00000336904 ANKRD66B4E2M5 251 aa8.8□□□□□ -1
SNCA-201ENST00000336904 E5RI56 91 aa8.8□□□□□ -1
SNCA-201ENST00000336904 H7C4K7 107 aa8.8□□□□□ -1
SNCA-201ENST00000336904 NPHS1O60500 1241 aa8.8□□□□□ -1
SNCA-201ENST00000336904 BAIAP3O94812 1187 aa8.8□□□□□ -1
SNCA-201ENST00000336904 RBP1P09455 135 aa8.8□□□□□ -1
SNCA-201ENST00000336904 MYL4P12829 197 aa8.8□□□□□ -1
SNCA-201ENST00000336904 HGFP14210 728 aa8.8□□□□□ -1
SNCA-201ENST00000336904 ETS2P15036 469 aa8.8□□□□□ -1
SNCA-201ENST00000336904 IMPDH1P20839 514 aa8.8□□□□□ -1
SNCA-201ENST00000336904 MAPKAPK2P49137 400 aa8.8□□□□□ -1
SNCA-201ENST00000336904 CDH4P55283 916 aa8.8□□□□□ -1
SNCA-201ENST00000336904 YBEYP58557 167 aaPredicted RBP8.8□□□□□ -1
SNCA-201ENST00000336904 PSME3P61289 254 aa8.8□□□□□ -1
SNCA-201ENST00000336904 HERVK_113P63132 956 aa8.8□□□□□ -1
SNCA-201ENST00000336904 PIGGQ5H8A4 983 aa8.8□□□□□ -1
SNCA-201ENST00000336904 CTSL3PQ5NE16 218 aa8.8□□□□□ -1
SNCA-201ENST00000336904 ADGRF1Q5T601 910 aa8.8□□□□□ -1
SNCA-201ENST00000336904 IL23RQ5VWK5 629 aa8.8□□□□□ -1
SNCA-201ENST00000336904 FOXB2Q5VYV0 432 aa8.8□□□□□ -1
SNCA-201ENST00000336904 TSPAN33Q86UF1 283 aa8.8□□□□□ -1
SNCA-201ENST00000336904 FBXO39Q8N4B4 442 aa8.8□□□□□ -1
SNCA-201ENST00000336904 RP9Q8TA86 221 aaKnown RBP8.8□□□□□ -1
SNCA-201ENST00000336904 LKAAEAR1Q8TD35 194 aa8.8□□□□□ -1
SNCA-201ENST00000336904 PXYLP1Q8TE99 480 aa8.8□□□□□ -1
SNCA-201ENST00000336904 LPGAT1Q92604 370 aa8.8□□□□□ -1
SNCA-201ENST00000336904 CNDP1Q96KN2 507 aa8.8□□□□□ -1
SNCA-201ENST00000336904 SPATA17Q96L03 361 aa8.8□□□□□ -1
SNCA-201ENST00000336904 ERVK-6Q9BXR3 956 aa8.8□□□□□ -1
SNCA-201ENST00000336904 GPR63Q9BZJ6 419 aa8.8□□□□□ -1
SNCA-201ENST00000336904 HCFC1R1Q9NWW0 138 aa8.8□□□□□ -1
SNCA-201ENST00000336904 SLAMF8Q9P0V8 285 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms