RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 RNF180Q86T96 592 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 TMEM135Q86UB9 458 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 CAMK1DQ8IU85 385 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 ARHGAP18Q8N392 663 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 ENDOVQ8N8Q3 282 aaKnown RBP8.21□□□□□ -1.1
HPS4-201ENST00000336873 ACTRT2Q8TDY3 377 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 AMBNQ9NP70 447 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 KCNH4Q9UQ05 1017 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 DGKBQ9Y6T7 804 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 WDR81Q562E7 1941 aa8.21□□□□□ -1.1
HPS4-201ENST00000336873 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.2□□□□□ -1.1
HPS4-201ENST00000336873 TRIM38O00635 465 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 KLF11O14901 512 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 TFPTP0C1Z6 253 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 PRKACGP22612 351 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 WARSP23381 471 aaKnown RBP8.2□□□□□ -1.1
HPS4-201ENST00000336873 ATP5C1P36542 298 aaKnown RBP8.2□□□□□ -1.1
HPS4-201ENST00000336873 HALP42357 657 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 CCNG1P51959 295 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 IST1P53990 364 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 SMAD3P84022 425 aaKnown RBP8.2□□□□□ -1.1
HPS4-201ENST00000336873 PKDCCQ504Y2 493 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 NANOGNBQ7Z5D8 188 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 GPR141Q7Z602 305 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 MON1AQ86VX9 555 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 MED8Q96G25 268 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 NSMCE2Q96MF7 247 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 CIPCQ9C0C6 399 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 VRTNQ9H8Y1 702 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 PNPLA8Q9NP80 782 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 DNAJC28Q9NX36 388 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 VTI1BQ9UEU0 232 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 USP22Q9UPT9 525 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 PRORSD1PA6NEY8 169 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 SLCO1B7G3V0H7 640 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 LBPP18428 481 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 FUT4P22083 530 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 POU1F1P28069 291 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 KCNC1P48547 511 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 APLP1P51693 650 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 ROR2Q01974 943 aaKnown RBP8.2□□□□□ -1.1
HPS4-201ENST00000336873 PIGFQ07326 219 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 DPYSQ14117 519 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 TRIM25Q14258 630 aaKnown RBP8.2□□□□□ -1.1
HPS4-201ENST00000336873 PAFAH1B3Q15102 231 aaKnown RBP8.2□□□□□ -1.1
HPS4-201ENST00000336873 INSCQ1MX18 579 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 ZNF697Q5TEC3 545 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 RGMBQ6NW40 437 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 SLC22A15Q8IZD6 547 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 CLYBLQ8N0X4 340 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 FAM110BQ8TC76 370 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 AURKBQ96GD4 344 aaPredicted RBP8.2□□□□□ -1.1
HPS4-201ENST00000336873 TPD52L3Q96J77 140 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 MRGPRX2Q96LB1 330 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 GPR22Q99680 433 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 ACAT2Q9BWD1 397 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 TLR9Q9NR96 1032 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 OAZ3Q9UMX2 235 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 POLR3HQ9Y535 204 aaPredicted RBP8.2□□□□□ -1.1
HPS4-201ENST00000336873 MAFKO60675 156 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 RTN3O95197 1032 aaPredicted RBP8.2□□□□□ -1.1
HPS4-201ENST00000336873 STAU1O95793 577 aaKnown RBP8.2□□□□□ -1.1
HPS4-201ENST00000336873 RAP1GDS1P52306 607 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 IL2P60568 153 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 OCA2Q04671 838 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 SLC44A4Q53GD3 710 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 SAMD4BQ5PRF9 694 aaKnown RBP8.2□□□□□ -1.1
HPS4-201ENST00000336873 GALNT10Q86SR1 603 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 RTL3Q8N8U3 475 aaKnown RBP8.2□□□□□ -1.1
HPS4-201ENST00000336873 STAG3L4Q8TBR4 150 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 SH3RF2Q8TEC5 729 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 TMEM169Q96HH4 297 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 FBXL20Q96IG2 436 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 C3orf30Q96M34 536 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 BBS2Q9BXC9 721 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 GPR62Q9BZJ7 368 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 FBXO44Q9H4M3 255 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 EPS8L2Q9H6S3 715 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 PARVBQ9HBI1 364 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 GDAP2Q9NXN4 497 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 PKD2L2Q9NZM6 624 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 SORCS3Q9UPU3 1222 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 MYRFQ9Y2G1 1151 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 PTCH2Q9Y6C5 1203 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 UNC80Q8N2C7 3258 aa8.2□□□□□ -1.1
HPS4-201ENST00000336873 TRAFD1O14545 582 aaPredicted RBP8.19□□□□□ -1.1
HPS4-201ENST00000336873 EI24O14681 340 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 TBL1XO60907 577 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 GJB5O95377 273 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 ESRRBO95718 433 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 CAPN1P07384 714 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 HSMCR30P0CW71 290 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 MYL4P12829 197 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 ITPKAP23677 461 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 CCNCP24863 283 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 HNF4AP41235 474 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 RECQLP46063 649 aaPredicted RBP8.19□□□□□ -1.1
HPS4-201ENST00000336873 RPL5P46777 297 aaKnown RBP8.19□□□□□ -1.1
HPS4-201ENST00000336873 PSMD7P51665 324 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 NEK2P51955 445 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms