RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 EPHB6O15197 1021 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 CILPO75339 1184 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 CDK14O94921 469 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 CYB5AP00167 134 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 HLA-DQA2P01906 255 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 C4BPAP04003 597 aaKnown RBP7.32□□□□□ -1.24
EPHA3-201ENST00000336596 H2AFXP16104 143 aaPredicted RBP7.32□□□□□ -1.24
EPHA3-201ENST00000336596 LRRC14Q15048 493 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 MBLAC2Q68D91 279 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 IYDQ6PHW0 289 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 MACC1Q6ZN28 852 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 UBE2R2Q712K3 238 aaPredicted RBP7.32□□□□□ -1.24
EPHA3-201ENST00000336596 TAS1R3Q7RTX0 852 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 FAM228AQ86W67 206 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 FSTL5Q8N475 847 aaPredicted RBP7.32□□□□□ -1.24
EPHA3-201ENST00000336596 SEMA4DQ92854 862 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 SP140LQ9H930 580 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 MID1IP1Q9NPA3 183 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 NKIRAS2Q9NYR9 191 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 PPIEQ9UNP9 301 aaKnown RBP7.32□□□□□ -1.24
EPHA3-201ENST00000336596 RAI2Q9Y5P3 530 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 BTNL10A8MVZ5 291 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 MAGEB3O15480 346 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 INSIG1O15503 277 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 RAD51CO43502 376 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 TSPAN6O43657 245 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 CNMDO75829 334 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 UGT2B4P06133 528 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 MGAT1P26572 445 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 TALDO1P37837 337 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 LMAN2Q12907 356 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 ZCCHC12Q6PEW1 402 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 GDPD4Q6W3E5 623 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 BEND5Q7L4P6 421 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 RBM12BQ8IXT5 1001 aaKnown RBP7.32□□□□□ -1.24
EPHA3-201ENST00000336596 PIK3C3Q8NEB9 887 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 ATG4AQ8WYN0 398 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 SMARCD2Q92925 531 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 SHISA4Q96DD7 197 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 APOL4Q9BPW4 351 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 DUSP23Q9BVJ7 150 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 RMI1Q9H9A7 625 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 ACOT7O00154 380 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 TRIM13O60858 407 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 VAPBO95292 243 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 ATG7O95352 703 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 TFPIP10646 304 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 HAPLN1P10915 354 aaPredicted RBP7.32□□□□□ -1.24
EPHA3-201ENST00000336596 ALAS2P22557 587 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 RPS15P62841 145 aaKnown RBP7.32□□□□□ -1.24
EPHA3-201ENST00000336596 GPAT3Q53EU6 434 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 GATAD2AQ86YP4 633 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 ALLCQ8N6M5 410 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 ACTL9Q8TC94 416 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 PPCDCQ96CD2 204 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 IGSF21Q96ID5 467 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 CNDP1Q96KN2 507 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 LMLNQ96KR4 655 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 HIST1H2AAQ96QV6 131 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 SPATS2LQ9NUQ6 558 aaKnown RBP7.32□□□□□ -1.24
EPHA3-201ENST00000336596 STXBP5LQ9Y2K9 1186 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 SMIM31A0A1B0GVY4 71 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 KMOO15229 486 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 PI15O43692 258 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 DFNA5O60443 496 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 SIN3BO75182 1162 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 SEMA3DO95025 777 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 CST3P01034 146 aaPredicted RBP7.32□□□□□ -1.24
EPHA3-201ENST00000336596 RPS21P63220 83 aaKnown RBP7.32□□□□□ -1.24
EPHA3-201ENST00000336596 FOXK1P85037 733 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 RPL6Q02878 288 aaKnown RBP7.32□□□□□ -1.24
EPHA3-201ENST00000336596 HNRNPDQ14103 355 aaKnown RBP7.32□□□□□ -1.24
EPHA3-201ENST00000336596 TAF1AQ15573 450 aaPredicted RBP7.32□□□□□ -1.24
EPHA3-201ENST00000336596 SLC10A6Q3KNW5 377 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 UBXN11Q5T124 520 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 PPP1R26Q5T8A7 1209 aaPredicted RBP7.32□□□□□ -1.24
EPHA3-201ENST00000336596 DET1Q7L5Y6 550 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.32□□□□□ -1.24
EPHA3-201ENST00000336596 RNF168Q8IYW5 571 aaPredicted RBP7.32□□□□□ -1.24
EPHA3-201ENST00000336596 DEPDC4Q8N2C3 294 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 RTL3Q8N8U3 475 aaKnown RBP7.32□□□□□ -1.24
EPHA3-201ENST00000336596 ST13P5Q8NFI4 369 aaPredicted RBP7.32□□□□□ -1.24
EPHA3-201ENST00000336596 LMX1AQ8TE12 382 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 RNF157Q96PX1 679 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 PAFAH2Q99487 392 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 MRPL57Q9BQC6 102 aaKnown RBP7.32□□□□□ -1.24
EPHA3-201ENST00000336596 TRMOQ9BU70 441 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 ITM2CQ9NQX7 267 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 DMTF1Q9Y222 760 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 NDUFAF1Q9Y375 327 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 MYH6P13533 1939 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 WDR27A2RRH5 827 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 PRMT5O14744 637 aaPredicted RBP7.32□□□□□ -1.24
EPHA3-201ENST00000336596 DGKIO75912 1065 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 CCNB2O95067 398 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 CBSLP0DN79 551 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 KCNE1P15382 129 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 MYL12AP19105 171 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 UGT1A1P22309 533 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 CBSP35520 551 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms