RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 IMPDH1P20839 514 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 EEF1B2P24534 225 aaKnown RBP16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 ECT2LQ008S8 904 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 KCNJ8Q15842 424 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 CYP51A1Q16850 503 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 BRMS1LQ5PSV4 323 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 TMEM126BQ8IUX1 230 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 MIER2Q8N344 545 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 RTL3Q8N8U3 475 aaKnown RBP16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 OR2T34Q8NGX1 318 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 OR10T2Q8NGX3 314 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 OR2T3Q8NH03 318 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 NSUN5Q96P11 429 aaKnown RBP16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 PARK7Q99497 189 aaKnown RBP16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 PCDH12Q9NPG4 1184 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 TREX1Q9NSU2 369 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 RNF11Q9Y3C5 154 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 DHRS12A0PJE2 317 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 UBFD1O14562 309 aaKnown RBP16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 CNOT3O75175 753 aaKnown RBP16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 CNTN5O94779 1100 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 TBX18O95935 607 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 MRPS6P82932 125 aaKnown RBP16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 ZNF235Q14590 738 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 ADRM1Q16186 407 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 PSMD5Q16401 504 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 PERM1Q5SV97 790 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 NANOGP8Q6NSW7 305 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 AGMOQ6ZNB7 445 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 CILP2Q8IUL8 1156 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 ESAMQ96AP7 390 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 RMDN1Q96DB5 314 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 PLEKHA8Q96JA3 519 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 SEMA3CQ99985 751 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 ACBD6Q9BR61 282 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 SPON2Q9BUD6 331 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 MEAF6Q9HAF1 191 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 NMUR1Q9HB89 426 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 PLOD2O00469 737 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 RHOBTB1O94844 696 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 CD52P31358 61 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 THPOP40225 353 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 ADAM17P78536 824 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 PRKCQQ04759 706 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 NFYCQ13952 458 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 NR1D2Q14995 579 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 RAP1GAP2Q684P5 730 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 BHLHA9Q7RTU4 235 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 ERI1Q8IV48 349 aaKnown RBP16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 PPP1R2P1Q96PQ5 205 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 TRIM15Q9C019 465 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 PNPLA3Q9NST1 481 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 NOD1Q9Y239 953 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 ARL5AQ9Y689 179 aa16.47■□□□□ 0.23
CDC42EP4-201ENST00000335793 H3BMM5 538 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 SOCS2O14508 198 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 AZIN1O14977 448 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 HTRA2O43464 458 aaPredicted RBP16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 HSPA1AP0DMV8 641 aaKnown RBP16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 HSPA1BP0DMV9 641 aaKnown RBP16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 FASP25445 335 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 GNA12Q03113 381 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 GRB7Q14451 532 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 LDLRAP1Q5SW96 308 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 TICAM1Q8IUC6 712 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 SNX29P2Q8IUI4 249 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 PELI3Q8N2H9 469 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 HMGCLL1Q8TB92 370 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 SH3RF2Q8TEC5 729 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 TWIST2Q8WVJ9 160 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 VPS33AQ96AX1 596 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.46■□□□□ 0.235e-6■■■■□ 20.3
CDC42EP4-201ENST00000335793 DKK3Q9UBP4 350 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 PRG3Q9Y2Y8 225 aaPredicted RBP16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 PSMD11O00231 422 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 TSPAN3O60637 253 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 KRT75O95678 551 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 NCK1P16333 377 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 UGT1A1P22309 533 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 UGT1A4P22310 534 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 UGT1A3P35503 534 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 UGT1A5P35504 534 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 TBX4P57082 545 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 SH3BP2P78314 561 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 MRNIPQ6NTE8 343 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 GPR141Q7Z602 305 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 ISCA2Q86U28 154 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 TCF12Q99081 682 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 HERC2P3Q9BVR0 1158 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 GSTO2Q9H4Y5 243 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 CLK4Q9HAZ1 481 aaKnown RBP16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 RNF112Q9ULX5 631 aa16.46■□□□□ 0.23
CDC42EP4-201ENST00000335793 GJB3O75712 270 aa16.46■□□□□ 0.22
CDC42EP4-201ENST00000335793 ENO2P09104 434 aaPredicted RBP16.46■□□□□ 0.22
CDC42EP4-201ENST00000335793 MTHFD1P11586 935 aaKnown RBP16.46■□□□□ 0.22
CDC42EP4-201ENST00000335793 ATP6V1B2P21281 511 aa16.46■□□□□ 0.22
CDC42EP4-201ENST00000335793 FMO4P31512 558 aa16.46■□□□□ 0.22
CDC42EP4-201ENST00000335793 ADRA1AP35348 466 aa16.46■□□□□ 0.22
CDC42EP4-201ENST00000335793 FOXA1P55317 472 aa16.46■□□□□ 0.22
CDC42EP4-201ENST00000335793 BNIP3Q12983 259 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms