RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 TBC1D3DA0A087WVF3 549 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 TBC1D3IA0A087WXS9 549 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 TBC1D3EA0A087X179 549 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 TBC1D3KA0A087X1G2 549 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 TBC1D3FA6NER0 549 aaPredicted RBP21.4■■□□□ 1.02
TPM1-204ENST00000334895 FAM47DPA6NHR8 397 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 TBC1D3LB9A6J9 549 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 CD3EAPO15446 510 aaKnown RBP21.4■■□□□ 1.02
TPM1-204ENST00000334895 LZTS3O60299 673 aaPredicted RBP21.4■■□□□ 1.02
TPM1-204ENST00000334895 TBC1D3HP0C7X1 549 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 SLC1A2P43004 574 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 CTBP1Q13363 440 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 ZDHHC20Q5W0Z9 365 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 TBC1D3GQ6DHY5 549 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 TBC1D3CQ6IPX1 549 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 KIAA1161Q6NSJ0 714 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 LRRC6Q86X45 466 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 NRSN1Q8IZ57 195 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 TBC1D3Q8IZP1 549 aaPredicted RBP21.4■■□□□ 1.02
TPM1-204ENST00000334895 GPR150Q8NGU9 434 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 MRRFQ96E11 262 aaKnown RBP21.4■■□□□ 1.02
TPM1-204ENST00000334895 NUS1Q96E22 293 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 PAFAH2Q99487 392 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 FAM167BQ9BTA0 163 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 RIOK2Q9BVS4 552 aaKnown RBP21.4■■□□□ 1.02
TPM1-204ENST00000334895 KDM4CQ9H3R0 1056 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 VIPAS39Q9H9C1 493 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 CATSPERZQ9NTU4 200 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 APPL1Q9UKG1 709 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 EML5Q05BV3 1969 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 POC1B-GALNT4F8VUJ3 575 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 TCEA3O75764 348 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 FAM155BO75949 473 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 TM7SF2O76062 418 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 UGT1A6P19224 532 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 UGT1A1P22309 533 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 UGT1A4P22310 534 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 UGT1A3P35503 534 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 UGT1A5P35504 534 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 RPS21P63220 83 aaKnown RBP21.4■■□□□ 1.02
TPM1-204ENST00000334895 MPP1Q00013 466 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 DMWDQ09019 674 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 NFATC2Q13469 925 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 MAP7D1Q3KQU3 841 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 NEK5Q6P3R8 708 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 LRIG3Q6UXM1 1119 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 HORMAD1Q86X24 394 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 CILP2Q8IUL8 1156 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 FAM160A2Q8N612 972 aaPredicted RBP21.4■■□□□ 1.02
TPM1-204ENST00000334895 C2CD4AQ8NCU7 369 aaPredicted RBP21.4■■□□□ 1.02
TPM1-204ENST00000334895 OR2T34Q8NGX1 318 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 SLC44A1Q8WWI5 657 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 CDKL2Q92772 493 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 TOE1Q96GM8 510 aaKnown RBP21.4■■□□□ 1.02
TPM1-204ENST00000334895 C1QTNF2Q9BXJ5 285 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 PRMT8Q9NR22 394 aaPredicted RBP21.4■■□□□ 1.02
TPM1-204ENST00000334895 RAD18Q9NS91 495 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 WSB2Q9NYS7 404 aaPredicted RBP21.4■■□□□ 1.02
TPM1-204ENST00000334895 FETUBQ9UGM5 382 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 TMPRSS11EQ9UL52 423 aa21.4■■□□□ 1.02
TPM1-204ENST00000334895 IGHV1OR15-9A0A0B4J2B8 117 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 AGAP14A8MT82 685 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 AGPSO00116 658 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 ZNF217O75362 1048 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 SOD1P00441 154 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 TDGF1P13385 188 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 GABRB3P28472 473 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 CACNG1Q06432 222 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 IFFO1Q0D2I5 559 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 AGERQ15109 404 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 ZNF284Q2VY69 593 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 ATP13A5Q4VNC0 1218 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 ZRANB3Q5FWF4 1079 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 TSSK4Q6SA08 328 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 ZNF765Q7L2R6 523 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 SNX20Q7Z614 316 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 DTX3LQ8TDB6 740 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 DCAKDQ8WVC6 231 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 KLK6Q92876 244 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 AP2M1Q96CW1 435 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 MCMBPQ9BTE3 642 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 TMEM109Q9BVC6 243 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 CDH19Q9H159 772 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 ASB8Q9H765 288 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 EURLQ9NYK6 297 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 FBXO5Q9UKT4 447 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 SLC30A1Q9Y6M5 507 aa21.39■■□□□ 1.01
TPM1-204ENST00000334895 PLXND1Q9Y4D7 1925 aa21.38■■□□□ 1.01
TPM1-204ENST00000334895 TRBV5-4A0A0C4DH59 114 aa21.38■■□□□ 1.01
TPM1-204ENST00000334895 FADS2P1A8MWK0 482 aa21.38■■□□□ 1.01
TPM1-204ENST00000334895 SEMA4FO95754 770 aa21.38■■□□□ 1.01
TPM1-204ENST00000334895 CD6P30203 668 aa21.38■■□□□ 1.01
TPM1-204ENST00000334895 SLCO1A2P46721 670 aa21.38■■□□□ 1.01
TPM1-204ENST00000334895 EIF3BP55884 814 aaKnown RBP21.38■■□□□ 1.01
TPM1-204ENST00000334895 NAB1Q13506 487 aa21.38■■□□□ 1.01
TPM1-204ENST00000334895 TYSND1Q2T9J0 566 aa21.38■■□□□ 1.01
TPM1-204ENST00000334895 FASTKD1Q53R41 847 aaKnown RBP21.38■■□□□ 1.01
TPM1-204ENST00000334895 ZNF789Q5FWF6 425 aa21.38■■□□□ 1.01
TPM1-204ENST00000334895 OTUD6BQ8N6M0 293 aa21.38■■□□□ 1.01
TPM1-204ENST00000334895 ZNF398Q8TD17 642 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms