RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 TSC22D3Q99576 134 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 SCN5AQ14524 2016 aa18.85■□□□□ 0.61
RFTN1-201ENST00000334133 TRIM38O00635 465 aa18.85■□□□□ 0.61
RFTN1-201ENST00000334133 CASQ2O14958 399 aaPredicted RBP18.85■□□□□ 0.61
RFTN1-201ENST00000334133 NRP2O60462 931 aa18.85■□□□□ 0.61
RFTN1-201ENST00000334133 CRTAMO95727 393 aa18.85■□□□□ 0.61
RFTN1-201ENST00000334133 ALDH1A1P00352 501 aa18.85■□□□□ 0.61
RFTN1-201ENST00000334133 CTPS1P17812 591 aa18.85■□□□□ 0.61
RFTN1-201ENST00000334133 TAF12Q16514 161 aa18.85■□□□□ 0.61
RFTN1-201ENST00000334133 NAIF1Q69YI7 327 aaPredicted RBP18.85■□□□□ 0.61
RFTN1-201ENST00000334133 NPAS4Q8IUM7 802 aa18.85■□□□□ 0.61
RFTN1-201ENST00000334133 VN1R3Q9BXE9 311 aa18.85■□□□□ 0.61
RFTN1-201ENST00000334133 ZDHHC7Q9NXF8 308 aa18.85■□□□□ 0.61
RFTN1-201ENST00000334133 ASB1Q9Y576 335 aa18.85■□□□□ 0.61
RFTN1-201ENST00000334133 AZIN1O14977 448 aa18.85■□□□□ 0.61
RFTN1-201ENST00000334133 ECI2O75521 394 aa18.85■□□□□ 0.61
RFTN1-201ENST00000334133 PGM3O95394 542 aa18.85■□□□□ 0.61
RFTN1-201ENST00000334133 MZF1P28698 734 aaPredicted RBP18.85■□□□□ 0.61
RFTN1-201ENST00000334133 MC4RP32245 332 aa18.85■□□□□ 0.61
RFTN1-201ENST00000334133 ARL1P40616 181 aaPredicted RBP18.85■□□□□ 0.61
RFTN1-201ENST00000334133 CDH4P55283 916 aa18.85■□□□□ 0.61
RFTN1-201ENST00000334133 ATXN7L2Q5T6C5 722 aaPredicted RBP18.85■□□□□ 0.61
RFTN1-201ENST00000334133 UGT3A1Q6NUS8 523 aa18.85■□□□□ 0.61
RFTN1-201ENST00000334133 FBXO39Q8N4B4 442 aa18.85■□□□□ 0.61
RFTN1-201ENST00000334133 CARNMT1Q8N4J0 409 aa18.85■□□□□ 0.61
RFTN1-201ENST00000334133 AUTS2Q8WXX7 1259 aa18.85■□□□□ 0.61
RFTN1-201ENST00000334133 HBEGFQ99075 208 aa18.85■□□□□ 0.61
RFTN1-201ENST00000334133 ACOX2Q99424 681 aa18.85■□□□□ 0.61
RFTN1-201ENST00000334133 TDRD1Q9BXT4 1180 aaKnown RBP18.85■□□□□ 0.61
RFTN1-201ENST00000334133 HMX1Q9NP08 348 aaPredicted RBP18.85■□□□□ 0.61
RFTN1-201ENST00000334133 NLE1Q9NVX2 485 aaPredicted RBP18.85■□□□□ 0.61
RFTN1-201ENST00000334133 C6orf203Q9P0P8 240 aaPredicted RBP18.85■□□□□ 0.61
RFTN1-201ENST00000334133 EPOP01588 193 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 CES1P23141 567 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 GRIA2P42262 883 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 ALDH7A1P49419 539 aaKnown RBP18.84■□□□□ 0.61
RFTN1-201ENST00000334133 DIO3P55073 304 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.84■□□□□ 0.61
RFTN1-201ENST00000334133 TAS2R42Q7RTR8 314 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 RAB44Q7Z6P3 723 aaPredicted RBP18.84■□□□□ 0.61
RFTN1-201ENST00000334133 SLC22A12Q96S37 553 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 TAS2R13Q9NYV9 303 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 FCF1Q9Y324 198 aaKnown RBP18.84■□□□□ 0.61
RFTN1-201ENST00000334133 ASB3Q9Y575 518 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 A0A0J9YYE9 177 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 A8MX80 341 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 H7C4K7 107 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 KDELR3O43731 214 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 CRCPO75575 148 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 C1RP00736 705 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 HGFP14210 728 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 INHBCP55103 352 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 STX1BP61266 288 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 TNK2Q07912 1038 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 TRIM25Q14258 630 aaKnown RBP18.84■□□□□ 0.61
RFTN1-201ENST00000334133 RARS2Q5T160 578 aaKnown RBP18.84■□□□□ 0.61
RFTN1-201ENST00000334133 GALNT7Q86SF2 657 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 AMIGO2Q86SJ2 522 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 GPR150Q8NGU9 434 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 LRTOMTQ8WZ04 291 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 CDK15Q96Q40 435 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 TM6SF2Q9BZW4 377 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 UNC93B1Q9H1C4 597 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 UBAP1Q9NZ09 502 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 VPS28Q9UK41 221 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 APPL1Q9UKG1 709 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 K7ERQ8 282 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 SPATA31D3P0C874 917 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 ITGB6P18564 788 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 APLP1P51693 650 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 ARF5P84085 180 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 CDKL1Q00532 357 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 CLCQ05315 142 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 TRAF2Q12933 501 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 HABP4Q5JVS0 413 aaKnown RBP18.84■□□□□ 0.61
RFTN1-201ENST00000334133 SPATA31D4Q6ZUB0 917 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 SLC43A3Q8NBI5 491 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 EEF1AKMT1Q8WVE0 214 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 SEPT8Q92599 483 aa18.84■□□□□ 0.61
RFTN1-201ENST00000334133 RPL10LQ96L21 214 aaKnown RBP18.84■□□□□ 0.61
RFTN1-201ENST00000334133 C2orf81A6NN90 581 aa18.83■□□□□ 0.61
RFTN1-201ENST00000334133 HMGA1P17096 107 aaKnown RBP18.83■□□□□ 0.61
RFTN1-201ENST00000334133 SEMG2Q02383 582 aa18.83■□□□□ 0.61
RFTN1-201ENST00000334133 RFTN1Q14699 578 aaPredicted RBP18.83■□□□□ 0.61
RFTN1-201ENST00000334133 SPAG4Q9NPE6 437 aa18.83■□□□□ 0.61
RFTN1-201ENST00000334133 EGFL7Q9UHF1 273 aa18.83■□□□□ 0.61
RFTN1-201ENST00000334133 CROTQ9UKG9 612 aa18.83■□□□□ 0.61
RFTN1-201ENST00000334133 PCDHB9Q9Y5E1 797 aa18.83■□□□□ 0.61
RFTN1-201ENST00000334133 ANKRD36A6QL64 1941 aa18.83■□□□□ 0.6
RFTN1-201ENST00000334133 ALPIP09923 528 aa18.83■□□□□ 0.6
RFTN1-201ENST00000334133 ETS2P15036 469 aa18.83■□□□□ 0.6
RFTN1-201ENST00000334133 GPX3P22352 226 aa18.83■□□□□ 0.6
RFTN1-201ENST00000334133 GKP32189 559 aa18.83■□□□□ 0.6
RFTN1-201ENST00000334133 KPNA1P52294 538 aaPredicted RBP18.83■□□□□ 0.6
RFTN1-201ENST00000334133 C18orf21Q32NC0 220 aaPredicted RBP18.83■□□□□ 0.6
RFTN1-201ENST00000334133 CPNE9Q8IYJ1 553 aa18.83■□□□□ 0.6
RFTN1-201ENST00000334133 PAF1Q8N7H5 531 aa18.83■□□□□ 0.6
RFTN1-201ENST00000334133 BIRC8Q96P09 236 aa18.83■□□□□ 0.6
RFTN1-201ENST00000334133 TRMOQ9BU70 441 aa18.83■□□□□ 0.6
RFTN1-201ENST00000334133 SLC25A23Q9BV35 468 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms