RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 STX3Q13277 289 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 UBXN2BQ14CS0 331 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 TBC1D3GQ6DHY5 549 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 TBC1D3CQ6IPX1 549 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 SCIMPQ6UWF3 145 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 USP45Q70EL2 814 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 BEND5Q7L4P6 421 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 TBC1D3Q8IZP1 549 aaPredicted RBP15.84■□□□□ 0.13
PDGFB-201ENST00000331163 VN1R2Q8NFZ6 395 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 NXPE3Q969Y0 559 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 ACDQ96AP0 544 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 E2F7Q96AV8 911 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 MRPL38Q96DV4 380 aaKnown RBP15.84■□□□□ 0.13
PDGFB-201ENST00000331163 CDKN2AIPNLQ96HQ2 116 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 ZFRQ96KR1 1074 aaKnown RBP15.84■□□□□ 0.13
PDGFB-201ENST00000331163 RIPOR3Q96MK2 946 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 MIPEPQ99797 713 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 SUV39H2Q9H5I1 410 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 CASS4Q9NQ75 786 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 CD274Q9NZQ7 290 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 TRMT6Q9UJA5 497 aaKnown RBP15.84■□□□□ 0.13
PDGFB-201ENST00000331163 COLQQ9Y215 455 aaPredicted RBP15.84■□□□□ 0.13
PDGFB-201ENST00000331163 ZNF510Q9Y2H8 683 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 COL4A6Q14031 1691 aa15.83■□□□□ 0.13
PDGFB-201ENST00000331163 MAGEB16A2A368 324 aa15.83■□□□□ 0.12
PDGFB-201ENST00000331163 LIN7AO14910 233 aaPredicted RBP15.83■□□□□ 0.12
PDGFB-201ENST00000331163 SNX2O60749 519 aa15.83■□□□□ 0.12
PDGFB-201ENST00000331163 METAP1P53582 386 aa15.83■□□□□ 0.12
PDGFB-201ENST00000331163 NME5P56597 212 aa15.83■□□□□ 0.12
PDGFB-201ENST00000331163 LRRC66Q68CR7 880 aa15.83■□□□□ 0.12
PDGFB-201ENST00000331163 RAET1GQ6H3X3 334 aa15.83■□□□□ 0.12
PDGFB-201ENST00000331163 PLD6Q8N2A8 252 aaKnown RBP15.83■□□□□ 0.12
PDGFB-201ENST00000331163 GALNT15Q8N3T1 639 aa15.83■□□□□ 0.12
PDGFB-201ENST00000331163 ARRDC2Q8TBH0 407 aa15.83■□□□□ 0.12
PDGFB-201ENST00000331163 ZNF75CPQ92670 426 aaPredicted RBP15.83■□□□□ 0.12
PDGFB-201ENST00000331163 CPNE1Q99829 537 aa15.83■□□□□ 0.12
PDGFB-201ENST00000331163 IL37Q9NZH6 218 aa15.83■□□□□ 0.12
PDGFB-201ENST00000331163 NUMBLQ9Y6R0 609 aa15.83■□□□□ 0.12
PDGFB-201ENST00000331163 CACNA1EQ15878 2313 aa15.83■□□□□ 0.12
PDGFB-201ENST00000331163 BTN3A1O00481 513 aa15.83■□□□□ 0.12
PDGFB-201ENST00000331163 PGM1P36871 562 aa15.83■□□□□ 0.12
PDGFB-201ENST00000331163 CCR10P46092 362 aa15.83■□□□□ 0.12
PDGFB-201ENST00000331163 ALDH18A1P54886 795 aaKnown RBP15.83■□□□□ 0.12
PDGFB-201ENST00000331163 TFF2Q03403 129 aa15.83■□□□□ 0.12
PDGFB-201ENST00000331163 RNF168Q8IYW5 571 aaPredicted RBP15.83■□□□□ 0.12
PDGFB-201ENST00000331163 SCML4Q8N228 414 aa15.83■□□□□ 0.12
PDGFB-201ENST00000331163 COMMD8Q9NX08 183 aa15.83■□□□□ 0.12
PDGFB-201ENST00000331163 STK39Q9UEW8 545 aa15.83■□□□□ 0.12
PDGFB-201ENST00000331163 TIMM44O43615 452 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 KATNA1O75449 491 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 PSMC3P17980 439 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 GSTT1P30711 240 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 RUNX3Q13761 415 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 STARD3Q14849 445 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 MYLK3Q32MK0 819 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 HTR3DQ70Z44 454 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 ZDHHC7Q9NXF8 308 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 XPR1Q9UBH6 696 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 B4GALT6Q9UBX8 382 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 SMG5Q9UPR3 1016 aaKnown RBP15.82■□□□□ 0.12
PDGFB-201ENST00000331163 ZNF638Q14966 1978 aaKnown RBP15.82■□□□□ 0.12
PDGFB-201ENST00000331163 LOC100653049A0A140TA62 436 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 EDF1O60869 148 aaKnown RBP15.82■□□□□ 0.12
PDGFB-201ENST00000331163 MMP20O60882 483 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 KRT34O76011 436 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 DLDP09622 509 aaKnown RBP15.82■□□□□ 0.12
PDGFB-201ENST00000331163 MYL2P10916 166 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 HNF1BP35680 557 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 CASP2P42575 452 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 SERPINB8P50452 374 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 ARFIP2P53365 341 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 SLC7A9P82251 487 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 PON2Q15165 354 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 ZNF284Q2VY69 593 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 CARD16Q5EG05 197 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 KLHDC10Q6PID8 442 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 IZUMO2Q6UXV1 221 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 RANBP10Q6VN20 620 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 CLNKQ7Z7G1 428 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 CRLF3Q8IUI8 442 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 BEND7Q8N7W2 519 aaPredicted RBP15.82■□□□□ 0.12
PDGFB-201ENST00000331163 HMGB4Q8WW32 186 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 NRG4Q8WWG1 115 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 GPR21Q99679 349 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 HEPHQ9BQS7 1158 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 LZTS1Q9Y250 596 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 LRCH1Q9Y2L9 728 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 FAM237BA0A1B0GVD1 139 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 KAT7O95251 611 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 SLC25A14O95258 325 aaPredicted RBP15.82■□□□□ 0.12
PDGFB-201ENST00000331163 CPA3P15088 417 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 TFEBP19484 476 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 PLIN5Q00G26 463 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 PFKFB4Q16877 469 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 SETMARQ53H47 684 aaPredicted RBP15.82■□□□□ 0.12
PDGFB-201ENST00000331163 TEDDM1Q5T9Z0 273 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 ADGRD1Q6QNK2 874 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 ARHGAP22Q7Z5H3 698 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 GORASP1Q9BQQ3 440 aa15.82■□□□□ 0.12
PDGFB-201ENST00000331163 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms