RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 L3HYPDHQ96EM0 354 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 ACOX2Q99424 681 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 ZNF696Q9H7X3 374 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 NT5C1B-RDH14C9J2C7 533 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 SOCS2O14508 198 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 INPP4BO15327 924 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 NCK1P16333 377 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 LBPP18428 481 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 PRDX3P30048 256 aaKnown RBP14□□□□□ -0.17
ATP2C1-201ENST00000328560 CLCQ05315 142 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 IL10RBQ08334 325 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 CDKN2AIPNLQ96HQ2 116 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 TUBB1Q9H4B7 451 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 NYNRINQ9P2P1 1898 aaKnown RBP13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 LOC285095A0A1B0GVY8 99 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 ARHGAP10A1A4S6 786 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 NPEPPSL1A6NEC2 478 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 MTHFD2P13995 350 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 PRKCQQ04759 706 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 TRAP1Q12931 704 aaKnown RBP13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 NFYCQ13952 458 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 SLC14A2Q15849 920 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 RBBP7Q16576 425 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 PTPRNQ16849 979 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 RABL3Q5HYI8 236 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 SLC24A5Q71RS6 500 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 ZNF683Q8IZ20 524 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 ZNF786Q8N393 782 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 PAF1Q8N7H5 531 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 GPR21Q99679 349 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 POLG2Q9UHN1 485 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 SPO11Q9Y5K1 396 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 SCN4AP35499 1836 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 GIPC1O14908 333 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 CLIC3O95833 236 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 FGF1P05230 155 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 CCND3P30281 292 aaPredicted RBP13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 NR1H2P55055 460 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 SLC15A3Q8IY34 581 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 BRSK1Q8TDC3 778 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 OSBPL11Q9BXB4 747 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 MRGBPQ9NV56 204 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 GALPQ9UBC7 116 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 IKZF3Q9UKT9 509 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 TCRBV3S1A0A5B6 114 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 DHRS12A0PJE2 317 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 HTRA2O43464 458 aaPredicted RBP13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 TLR5O60602 858 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 HLA-DPA1P20036 260 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 TIAL1Q01085 375 aaKnown RBP eCLIP13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 TRIP4Q15650 581 aaPredicted RBP13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 CLLU1OSQ5K130 101 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 GLT6D1Q7Z4J2 308 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 CHERPQ8IWX8 916 aaKnown RBP13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 LPCAT1Q8NF37 534 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 CYGBQ8WWM9 190 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 STON2Q8WXE9 905 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 AARSD1Q9BTE6 412 aaKnown RBP13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 TLR8Q9NR97 1041 aaKnown RBP13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 ETAA1Q9NY74 926 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 TAS2R13Q9NYV9 303 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 LRFN2Q9ULH4 789 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 PCDHGC4Q9Y5F7 938 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 ZNF236Q9UL36 1845 aa13.99□□□□□ -0.17
ATP2C1-201ENST00000328560 F5H5T6 163 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 IL10P22301 178 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 PCSK6P29122 969 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 RGRP47804 291 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 RPS24P62847 133 aaKnown RBP13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 GALNT1Q10472 559 aaPredicted RBP13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 DUSP4Q13115 394 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 ANKS6Q68DC2 871 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 RTN4RL1Q86UN2 441 aaPredicted RBP13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 STAG3L4Q8TBR4 150 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 DDI1Q8WTU0 396 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 RMND5BQ96G75 393 aaPredicted RBP13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 ZNF597Q96LX8 424 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 HCSTQ9UBK5 93 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 MYRFQ9Y2G1 1151 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 ECI2O75521 394 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 GNAO1P09471 354 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 ACADVLP49748 655 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 STC1P52823 247 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 NRG1Q02297 640 aaPredicted RBP13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 RAD51Q06609 339 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 CYP51A1Q16850 503 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 CDK15Q96Q40 435 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 SEPHS2Q99611 448 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 PTTG2Q9NZH5 202 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 CBX4O00257 560 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 H6PDO95479 791 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 TACR2P21452 398 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 INPP5AQ14642 412 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 PARP15Q460N3 678 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 ZRANB3Q5FWF4 1079 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 NADSYN1Q6IA69 706 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 TEX26Q8N6G2 289 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 RIN3Q8TB24 985 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 TMEM74Q96NL1 305 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms