RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 UBXN8O00124 270 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 HCRTO43612 131 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 KPNA6O60684 536 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 CPB1P15086 417 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 ERCC2P18074 760 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 IMPDH1P20839 514 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 ALDH4A1P30038 563 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 HOXD11P31277 338 aaPredicted RBP12.74□□□□□ -0.37
CCDC60-201ENST00000327554 IGBP1P78318 339 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 POU4F1Q01851 419 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 DGUOKQ16854 277 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 AASDHQ4L235 1098 aaPredicted RBP12.74□□□□□ -0.37
CCDC60-201ENST00000327554 FAM160B1Q5W0V3 765 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 BLOC1S3Q6QNY0 202 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 RBM23Q86U06 439 aaKnown RBP12.74□□□□□ -0.37
CCDC60-201ENST00000327554 FAM83AQ86UY5 434 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 C2CD4AQ8NCU7 369 aaPredicted RBP12.74□□□□□ -0.37
CCDC60-201ENST00000327554 OR13J1Q8NGT2 312 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 NDRG1Q92597 394 aaKnown RBP12.74□□□□□ -0.37
CCDC60-201ENST00000327554 TRMOQ9BU70 441 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 DPEP3Q9H4B8 488 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 NOL6Q9H6R4 1146 aaKnown RBP12.74□□□□□ -0.37
CCDC60-201ENST00000327554 SDR39U1Q9NRG7 319 aaPredicted RBP12.74□□□□□ -0.37
CCDC60-201ENST00000327554 COX16Q9P0S2 106 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 SLCO3A1Q9UIG8 710 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 DNAJC15Q9Y5T4 150 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 M0R3G1 203 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 TNFRSF10AO00220 468 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 KCNK2O95069 426 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 CHRNA1P02708 482 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 PIGAP37287 484 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 EIF2DP41214 584 aaKnown RBP12.74□□□□□ -0.37
CCDC60-201ENST00000327554 CD47Q08722 323 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 STXBP2Q15833 593 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 FXNQ16595 210 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 PCID2Q5JVF3 399 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 FAM209AQ5JX71 171 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 ARHGAP17Q68EM7 881 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 NAPEPLDQ6IQ20 393 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 NEK10Q6ZWH5 1172 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 STK32CQ86UX6 486 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 KIAA2013Q8IYS2 634 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 CLEC4FQ8N1N0 589 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 FAR1Q8WVX9 515 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 HTRA1Q92743 480 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 AURKBQ96GD4 344 aaPredicted RBP12.74□□□□□ -0.37
CCDC60-201ENST00000327554 TMEM74Q96NL1 305 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 NODALQ96S42 347 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 AMBRA1Q9C0C7 1298 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 CEP44Q9C0F1 390 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 TRIT1Q9H3H1 467 aaKnown RBP12.74□□□□□ -0.37
CCDC60-201ENST00000327554 NECTIN3Q9NQS3 549 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 SLC2A6Q9UGQ3 507 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 TRHDEQ9UKU6 1024 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 TESMINQ9Y4I5 508 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 SNX5Q9Y5X3 404 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 GOLGB1Q14789 3259 aaKnown RBP12.74□□□□□ -0.37
CCDC60-201ENST00000327554 GAS2O43903 313 aaKnown RBP12.73□□□□□ -0.37
CCDC60-201ENST00000327554 RFPL2O75678 378 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 CAPN15O75808 1086 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 SUPT7LO94864 414 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 KRT75O95678 551 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 HPRP00739 348 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 ACVR2AP27037 513 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 PPP5CP53041 499 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 SLC12A2P55011 1212 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 EEFSECP57772 596 aaKnown RBP12.73□□□□□ -0.37
CCDC60-201ENST00000327554 PHC1P78364 1004 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 BST2Q10589 180 aaKnown RBP12.73□□□□□ -0.37
CCDC60-201ENST00000327554 NFYCQ13952 458 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 POU6F1Q14863 301 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 UNC50Q53HI1 259 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 ZNF678Q5SXM1 525 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 AGAP9Q5VTM2 703 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 TTC23Q5W5X9 447 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 KRT27Q7Z3Y8 459 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 BNIPLQ7Z465 357 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 SLC22A9Q8IVM8 553 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 LGI2Q8N0V4 545 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 CALML6Q8TD86 181 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 L3HYPDHQ96EM0 354 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 YME1L1Q96TA2 773 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 DSEQ9UL01 958 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 LOC285556D6RIA3 1793 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 BRCA1P38398 1863 aaKnown RBP12.73□□□□□ -0.37
CCDC60-201ENST00000327554 EIF3FO00303 357 aaPredicted RBP12.73□□□□□ -0.37
CCDC60-201ENST00000327554 SLC1A7O00341 560 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 PIP5K1BO14986 540 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 SNPHO15079 494 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 MAN1A2O60476 641 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 LTA4HP09960 611 aaKnown RBP12.73□□□□□ -0.37
CCDC60-201ENST00000327554 CDH1P12830 882 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 ADORA2BP29275 332 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 KCNC1P48547 511 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 SERPINB10P48595 397 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 ALDH7A1P49419 539 aaKnown RBP12.73□□□□□ -0.37
CCDC60-201ENST00000327554 LSM3P62310 102 aaKnown RBP12.73□□□□□ -0.37
CCDC60-201ENST00000327554 SH3BP2P78314 561 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 FUT11Q495W5 492 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 PAGE3Q5JUK9 113 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms