RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 CTBP1Q13363 440 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 ACOX1Q15067 660 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 ZRANB3Q5FWF4 1079 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 LGSNQ5TDP6 509 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 RFLNAQ6ZTI6 216 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 FLCNQ8NFG4 579 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 MZB1Q8WU39 189 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 ATP6V1G3Q96LB4 118 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 TCF12Q99081 682 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 IER2Q9BTL4 223 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 RHOJQ9H4E5 214 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 INTS10Q9NVR2 710 aaKnown RBP10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 NCKAP1Q9Y2A7 1128 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 PLXNB3Q9ULL4 1909 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 TRBV5-4A0A0C4DH59 114 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 H3BQF6 201 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 WNT9AO14904 365 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 SNRPAP09012 282 aaKnown RBP10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 PRSS56P0CW18 603 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 SPRP35270 261 aaPredicted RBP10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 SIGLEC14Q08ET2 396 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 NFATC2Q13469 925 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 CHRNA6Q15825 494 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 GPR33Q49SQ1 333 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 HENMT1Q5T8I9 393 aaKnown RBP10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 RNF187Q5TA31 235 aaPredicted RBP10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 PSAPL1Q6NUJ1 521 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 Q6ZVL8 140 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 ZC3HC1Q86WB0 502 aaKnown RBP10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 PIANPQ8IYJ0 282 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 CYP4X1Q8N118 509 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 SPEM1Q8N4L4 309 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 TSTD1Q8NFU3 115 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 HMGB4Q8WW32 186 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 TLCD1Q96CP7 247 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 MTBPQ96DY7 904 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 FAM83DQ9H4H8 585 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 PREBQ9HCU5 417 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 FBXO6Q9NRD1 293 aaPredicted RBP10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 BCCIPQ9P287 314 aaKnown RBP eCLIP10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 HMGB1P1B2RPK0 211 aaPredicted RBP10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 STK25O00506 426 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 MMP20O60882 483 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 S1PR4O95977 384 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 IGLV3-19P01714 112 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 ITGA2BP08514 1039 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 F7P08709 466 aaPredicted RBP10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 GABRB3P28472 473 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 PMLP29590 882 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 TTPAP49638 278 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 ADPRHP54922 357 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 ITGA9Q13797 1035 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 BMPR2Q13873 1038 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 ZNF284Q2VY69 593 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 LYPLAL1Q5VWZ2 237 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 KIAA1161Q6NSJ0 714 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 CERS6Q6ZMG9 384 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 TRAM1L1Q8N609 369 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 ZNF398Q8TD17 642 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 ULK4Q96C45 1275 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 NUS1Q96E22 293 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 VPS39Q96JC1 886 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 ZSCAN5AQ9BUG6 496 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 ABCG8Q9H221 673 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 KDM4CQ9H3R0 1056 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 FAM96AQ9H5X1 160 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 ASB8Q9H765 288 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 SMOXQ9NWM0 555 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 C2orf42Q9NWW7 574 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 FAM53CQ9NYF3 392 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 USP36Q9P275 1121 aaKnown RBP10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 CD84Q9UIB8 345 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 VPS9D1Q9Y2B5 631 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 HMX2A2RU54 273 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 AGAP14A8MT82 685 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 TRIM49D1C9J1S8 452 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 PFDN6O15212 129 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 LZTS3O60299 673 aaPredicted RBP10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 RECQL5O94762 991 aaPredicted RBP10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 PCDH8O95206 1070 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 AHSGP02765 367 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 KRT15P19012 456 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 MAGEA9P43362 315 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 TPMTP51580 245 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 CLCN5P51795 746 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 DNAJC3Q13217 504 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 TAS2R42Q7RTR8 314 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 LDB1Q86U70 411 aaPredicted RBP10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 OR14C36Q8NHC7 312 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 EDAQ92838 391 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 RIOK2Q9BVS4 552 aaKnown RBP10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 KCTD5Q9NXV2 234 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 CORO1CQ9ULV4 474 aaPredicted RBP10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 COQ6Q9Y2Z9 468 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 SIT1Q9Y3P8 196 aa10.19□□□□□ -0.78
VIPAS39-201ENST00000327028 BPTFQ12830 3046 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 GPR39O43194 453 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 HAUS5O94927 633 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 PPARGP37231 505 aaPredicted RBP10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 ABCG1P45844 678 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms