RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 DDX39BQ13838 428 aaKnown RBP6.32□□□□□ -1.4
SSH1-202ENST00000326495 ARL6IP1Q15041 203 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 NTRK3Q16288 839 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 RPL13AP3Q6NVV1 102 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 DRICH1Q6PGQ1 229 aaPredicted RBP6.32□□□□□ -1.4
SSH1-202ENST00000326495 INO80EQ8NBZ0 244 aaPredicted RBP6.32□□□□□ -1.4
SSH1-202ENST00000326495 SLC5A5Q92911 643 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 HEBP2Q9Y5Z4 205 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 LAMB1P07942 1786 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 PRORSD1PA6NEY8 169 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 NUAK1O60285 661 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 PGK1P00558 417 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 PRKD1Q15139 912 aaPredicted RBP6.32□□□□□ -1.4
SSH1-202ENST00000326495 PFKFB4Q16877 469 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 CDC42EP5Q6NZY7 148 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 CYP20A1Q6UW02 462 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 PHACTR4Q8IZ21 702 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 DENND2DQ9H6A0 471 aaPredicted RBP6.32□□□□□ -1.4
SSH1-202ENST00000326495 SENP2Q9HC62 589 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 PNMA8BQ9ULN7 279 aaPredicted RBP6.32□□□□□ -1.4
SSH1-202ENST00000326495 SLX4Q8IY92 1834 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 PIGNO95427 931 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 OR1E1P30953 314 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 RORAP35398 523 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 SCNN1AP37088 669 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 MBTD1Q05BQ5 628 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 EPC2Q52LR7 807 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 HYIQ5T013 277 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 C1orf94Q6P1W5 598 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 ARHGAP36Q6ZRI8 547 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 ILDR2Q71H61 639 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 ACOT1Q86TX2 421 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 CACNA1BQ00975 2339 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 PRPS2P11908 318 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 ZNF37AP17032 561 aaPredicted RBP6.32□□□□□ -1.4
SSH1-202ENST00000326495 KDELR1P24390 212 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 SLC6A4P31645 630 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 USP46P62068 366 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 SLC6A3Q01959 620 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 ILF3Q12906 894 aaKnown RBP eCLIP6.32□□□□□ -1.4
SSH1-202ENST00000326495 BPIFB6Q8NFQ5 453 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 TBCDQ9BTW9 1192 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 MED28Q9H204 178 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 PXMP2Q9NR77 195 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 TRMT13Q9NUP7 481 aaKnown RBP6.32□□□□□ -1.4
SSH1-202ENST00000326495 RBM22Q9NW64 420 aaKnown RBP eCLIP6.32□□□□□ -1.4
SSH1-202ENST00000326495 PCDHGC3Q9UN70 934 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 TMED5Q9Y3A6 229 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 ACSL4O60488 711 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 SLC22A3O75751 556 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 IFNA6P05013 189 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 HTR1BP28222 390 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 IDH2P48735 452 aaKnown RBP6.32□□□□□ -1.4
SSH1-202ENST00000326495 SLITRK4Q8IW52 837 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 POMGNT2Q8NAT1 580 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 ACE2Q9BYF1 805 aaPredicted RBP6.32□□□□□ -1.4
SSH1-202ENST00000326495 PTCH2Q9Y6C5 1203 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 MDC1Q14676 2089 aaKnown RBP6.32□□□□□ -1.4
SSH1-202ENST00000326495 ANKDD1BA6NHY2 528 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 MRPS14O60783 128 aaKnown RBP6.32□□□□□ -1.4
SSH1-202ENST00000326495 PON3Q15166 354 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 DUPD1Q68J44 220 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 RTL4Q6ZR62 310 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 GPRIN3Q6ZVF9 776 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 PTAR1Q7Z6K3 402 aaPredicted RBP6.32□□□□□ -1.4
SSH1-202ENST00000326495 NAT16Q8N8M0 369 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 BBS1Q8NFJ9 593 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 TSPAN16Q9UKR8 245 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 SAMHD1Q9Y3Z3 626 aaKnown RBP6.32□□□□□ -1.4
SSH1-202ENST00000326495 CNTNAP2Q9UHC6 1331 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 PI4KAP42356 2102 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 NALCNQ8IZF0 1738 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 FADS2P1A8MWK0 482 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 ACKR2O00590 384 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 PMM2O15305 246 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 SUV39H1O43463 412 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 B3GAT3O94766 335 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 RHOCP08134 193 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 ALDH4A1P30038 563 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 SRP54P61011 504 aaKnown RBP6.32□□□□□ -1.4
SSH1-202ENST00000326495 CHSY3Q70JA7 882 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 BEND5Q7L4P6 421 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 MGME1Q9BQP7 344 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 SMPD3Q9NY59 655 aaPredicted RBP6.32□□□□□ -1.4
SSH1-202ENST00000326495 TDRKHQ9Y2W6 561 aaKnown RBP6.32□□□□□ -1.4
SSH1-202ENST00000326495 SCN4AP35499 1836 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 KRT36O76013 467 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 SGCGQ13326 291 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 LARS2Q15031 903 aaKnown RBP6.32□□□□□ -1.4
SSH1-202ENST00000326495 CARTPTQ16568 116 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 RBM48Q5RL73 367 aaKnown RBP6.32□□□□□ -1.4
SSH1-202ENST00000326495 ARMC12Q5T9G4 340 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 UNQ6126/PRO20091Q6UXV3 157 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 C11orf74Q86VG3 221 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 SLC6A16Q9GZN6 736 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 VPS28Q9UK41 221 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 KAT7O95251 611 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 TKTL1P51854 596 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 MTURNQ8N3F0 131 aa6.32□□□□□ -1.4
SSH1-202ENST00000326495 SCAIQ8N9R8 606 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms