RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 FSCN1Q16658 493 aaKnown RBP16.69■□□□□ 0.26
SSH1-201ENST00000326470 RGS21Q2M5E4 152 aa16.69■□□□□ 0.26
SSH1-201ENST00000326470 AASDHQ4L235 1098 aaPredicted RBP16.69■□□□□ 0.26
SSH1-201ENST00000326470 KDELC1Q6UW63 502 aa16.69■□□□□ 0.26
SSH1-201ENST00000326470 ITPKCQ96DU7 683 aa16.69■□□□□ 0.26
SSH1-201ENST00000326470 GPN2Q9H9Y4 310 aaPredicted RBP16.69■□□□□ 0.26
SSH1-201ENST00000326470 FANCEQ9HB96 536 aa16.69■□□□□ 0.26
SSH1-201ENST00000326470 VTA1Q9NP79 307 aa16.69■□□□□ 0.26
SSH1-201ENST00000326470 GMIPQ9P107 970 aa16.69■□□□□ 0.26
SSH1-201ENST00000326470 RBM47A0AV96 593 aaKnown RBP16.68■□□□□ 0.26
SSH1-201ENST00000326470 DDNO94850 711 aaPredicted RBP16.68■□□□□ 0.26
SSH1-201ENST00000326470 S1PR4O95977 384 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 ALBP02768 609 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 CD1DP15813 335 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 BDNFP23560 247 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 IGFBP6P24592 240 aaPredicted RBP16.68■□□□□ 0.26
SSH1-201ENST00000326470 APLP1P51693 650 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 CBX2Q14781 532 aaPredicted RBP16.68■□□□□ 0.26
SSH1-201ENST00000326470 UBXN11Q5T124 520 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 TIGD7Q6NT04 549 aaPredicted RBP16.68■□□□□ 0.26
SSH1-201ENST00000326470 TBPL2Q6SJ96 375 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 PIM3Q86V86 326 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 ARRDC4Q8NCT1 418 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 RAB2BQ8WUD1 216 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 SNX19Q92543 992 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 BDH2Q9BUT1 245 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 NANOGQ9H9S0 305 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 RNF181Q9P0P0 153 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 POLG2Q9UHN1 485 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 PSME2Q9UL46 239 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 GPR45Q9Y5Y3 372 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 BPTFQ12830 3046 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 RRN3P2A6NIE6 340 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 H0Y858 1186 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 SLC7A4O43246 635 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 ADAM23O75077 832 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 CLPXO76031 633 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 SIX3O95343 332 aaPredicted RBP16.68■□□□□ 0.26
SSH1-201ENST00000326470 ALDH2P05091 517 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 CDH3P22223 829 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 EEF1B2P24534 225 aaKnown RBP16.68■□□□□ 0.26
SSH1-201ENST00000326470 ELK4P28324 431 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 HOXC13P31276 330 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 SERPINH1P50454 418 aaKnown RBP16.68■□□□□ 0.26
SSH1-201ENST00000326470 MAPK10P53779 464 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 BROXQ5VW32 411 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 DLK2Q6UY11 383 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 RAB44Q7Z6P3 723 aaPredicted RBP16.68■□□□□ 0.26
SSH1-201ENST00000326470 LDB1Q86U70 411 aaPredicted RBP16.68■□□□□ 0.26
SSH1-201ENST00000326470 OR52K2Q8NGK3 314 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 SH3RF2Q8TEC5 729 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 EXT2Q93063 718 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 GLT1D1Q96MS3 346 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 MUS81Q96NY9 551 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 ATP13A1Q9HD20 1204 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 TLR9Q9NR96 1032 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 SEPT3Q9UH03 358 aa16.68■□□□□ 0.26
SSH1-201ENST00000326470 FGF10O15520 208 aaPredicted RBP16.67■□□□□ 0.26
SSH1-201ENST00000326470 B4GAT1O43505 415 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 LINC00032P0C843 101 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 EEFSECP57772 596 aaKnown RBP16.67■□□□□ 0.26
SSH1-201ENST00000326470 GNA12Q03113 381 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 XAF1Q6GPH4 301 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 GALNT18Q6P9A2 607 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 ZBTB46Q86UZ6 589 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 SMG8Q8ND04 991 aaKnown RBP16.67■□□□□ 0.26
SSH1-201ENST00000326470 NRBF2Q96F24 287 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 SENP8Q96LD8 212 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 KCNA7Q96RP8 456 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 MFSD1Q9H3U5 465 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 ARMC7Q9H6L4 198 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 CATSPERBQ9H7T0 1116 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 ELP3Q9H9T3 547 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 NDFIP2Q9NV92 336 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 PTCH2Q9Y6C5 1203 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 ZFC3H1O60293 1989 aaKnown RBP16.67■□□□□ 0.26
SSH1-201ENST00000326470 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.67■□□□□ 0.26
SSH1-201ENST00000326470 TYW5A2RUC4 315 aaKnown RBP16.67■□□□□ 0.26
SSH1-201ENST00000326470 H3BMM5 538 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 VPS4BO75351 444 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 MT-ND1P03886 318 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 IREB2P48200 963 aaKnown RBP16.67■□□□□ 0.26
SSH1-201ENST00000326470 DIO3P55073 304 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 RCAN2Q14206 197 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 EGFLAMQ63HQ2 1017 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 OR6P1Q8NGX9 317 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 VPS33AQ96AX1 596 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 BIRC7Q96CA5 298 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 CHID1Q9BWS9 393 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 SLC25A51Q9H1U9 297 aa16.67■□□□□ 0.26
SSH1-201ENST00000326470 TRNAU1APQ9NX07 287 aaKnown RBP16.67■□□□□ 0.26
SSH1-201ENST00000326470 C1orf232A0A0U1RR37 186 aa16.66■□□□□ 0.26
SSH1-201ENST00000326470 ASPDHA6ND91 283 aa16.66■□□□□ 0.26
SSH1-201ENST00000326470 LRRC14BA6NHZ5 514 aa16.66■□□□□ 0.26
SSH1-201ENST00000326470 CXCL11O14625 94 aa16.66■□□□□ 0.26
SSH1-201ENST00000326470 ABCB7O75027 752 aa16.66■□□□□ 0.26
SSH1-201ENST00000326470 MMP3P08254 477 aa16.66■□□□□ 0.26
SSH1-201ENST00000326470 MTHFD2P13995 350 aa16.66■□□□□ 0.26
SSH1-201ENST00000326470 LHX1P48742 406 aa16.66■□□□□ 0.26
SSH1-201ENST00000326470 OXCT1P55809 520 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms