RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 MS4A13Q5J8X5 152 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 KDELC1Q6UW63 502 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 STK32CQ86UX6 486 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 PELI3Q8N2H9 469 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 IMP4Q96G21 291 aaKnown RBP12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 TBCDQ9BTW9 1192 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 TRMOQ9BU70 441 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 CINPQ9BW66 212 aaPredicted RBP12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 PAIP1Q9H074 479 aaKnown RBP12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 CDC14AQ9UNH5 594 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 PCDHGC4Q9Y5F7 938 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 FADS3Q9Y5Q0 445 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 NT5C1B-RDH14C9J2C7 533 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 ALBP02768 609 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 PBX3P40426 434 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 FAM171A1Q5VUB5 890 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 HMBOX1Q6NT76 420 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 CHERPQ8IWX8 916 aaKnown RBP12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 FIBCD1Q8N539 461 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 STAG3L4Q8TBR4 150 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 SLCO4A1Q96BD0 722 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 SDCCAG3Q96C92 435 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 MAELQ96JY0 434 aaKnown RBP12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 CCDC138Q96M89 665 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 MTG1Q9BT17 334 aaPredicted RBP12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 ALG2Q9H553 416 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 VPS45Q9NRW7 570 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 GALPQ9UBC7 116 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 POLG2Q9UHN1 485 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 A0A087WXM4 84 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 A0A1B0GTL3 188 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 A8MX80 341 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 NIPSNAP2O75323 286 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 LDLRP01130 860 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 AKR1A1P14550 325 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 POLD2P49005 469 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 UFM1P61960 85 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 NRG1Q02297 640 aaPredicted RBP12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 KCTD21Q4G0X4 260 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 C16orf59Q7L2K0 433 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 MON1AQ86VX9 555 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 ZNF280BQ86YH2 543 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 DCP1BQ8IZD4 617 aaKnown RBP12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 FBXO30Q8TB52 745 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 FIG4Q92562 907 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 LRRC58Q96CX6 371 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 THUMPD3Q9BV44 507 aaKnown RBP12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 MRGBPQ9NV56 204 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 PKD2L2Q9NZM6 624 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 EBF1Q9UH73 591 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 AFF4Q9UHB7 1163 aaKnown RBP12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 EIF2B4Q9UI10 523 aaKnown RBP12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 VPS28Q9UK41 221 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 A0A0D9SEW6 157 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 IQCF5A8MTL0 148 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 FFAR3O14843 346 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 GPR42O15529 346 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 GPR39O43194 453 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 KPNA6O60684 536 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 E2F6O75461 281 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 OR4F21O95013 312 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 RHOQP17081 205 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 MAP4P27816 1152 aaKnown RBP12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 MTPNP58546 118 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 HPCAP84074 193 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 PTPRRQ15256 657 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 ATP6AP1LQ52LC2 224 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 LARP4Q71RC2 724 aaKnown RBP eCLIP12.83□□□□□ -0.362e-79■■□□□ 13.9
HMGCS1-201ENST00000325110 METTL6Q8TCB7 284 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 NUDT8Q8WV74 236 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 C17orf80Q9BSJ5 609 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 C9orf16Q9BUW7 83 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 SLAMF8Q9P0V8 285 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 ANAPC2Q9UJX6 822 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 STX7O15400 261 aaKnown RBP12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 CD1DP15813 335 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 ZNF37AP17032 561 aaPredicted RBP12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 GSK3BP49841 420 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 CDKN1CP49918 316 aaPredicted RBP12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 YBX1P67809 324 aaKnown RBP12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 IL27RAQ6UWB1 636 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 ERMP1Q7Z2K6 904 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 ANKRD23Q86SG2 305 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 CDC26Q8NHZ8 85 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 ZC3H15Q8WU90 426 aaKnown RBP12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 MFSD1Q9H3U5 465 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 NOL6Q9H6R4 1146 aaKnown RBP12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 SYTL2Q9HCH5 934 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 CSNK1G1Q9HCP0 422 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 FAM8A1Q9UBU6 413 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 TMCO1Q9UM00 188 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 F5H5T6 163 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 PARNO95453 639 aaKnown RBP12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 TFPTP0C1Z6 253 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 HMOX2P30519 316 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 ZNF157P51786 506 aaPredicted RBP12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 KCNQ1P51787 676 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 MERTKQ12866 999 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 SEMA3AQ14563 771 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms