RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 RFWD2Q8NHY2 731 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 HMGB4Q8WW32 186 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 PGAP3Q96FM1 320 aaPredicted RBP12.75□□□□□ -0.37
CCDC149-201ENST00000324309 MMADHCQ9H3L0 296 aaPredicted RBP12.75□□□□□ -0.37
CCDC149-201ENST00000324309 ELOVL2Q9NXB9 296 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 RAP2CQ9Y3L5 183 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 DGKIO75912 1065 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 DHPSP49366 369 aaPredicted RBP12.75□□□□□ -0.37
CCDC149-201ENST00000324309 STXBP1P61764 594 aaKnown RBP12.75□□□□□ -0.37
CCDC149-201ENST00000324309 ABRQ12979 859 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 RUNX3Q13761 415 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 ASTE1Q2TB18 679 aaPredicted RBP12.75□□□□□ -0.37
CCDC149-201ENST00000324309 MARCH8Q5T0T0 291 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 AMZ2Q86W34 360 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 SHISA4Q96DD7 197 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 IMP3Q9NV31 184 aaKnown RBP12.75□□□□□ -0.37
CCDC149-201ENST00000324309 SH3BP4Q9P0V3 963 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 AURKCQ9UQB9 309 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 REXO2Q9Y3B8 237 aaKnown RBP12.75□□□□□ -0.37
CCDC149-201ENST00000324309 OR5K4A6NMS3 321 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 B2RBV5 119 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 PI15O43692 258 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 PAPSS2O95340 614 aaPredicted RBP12.75□□□□□ -0.37
CCDC149-201ENST00000324309 BGNP21810 368 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 ATP6V1E1P36543 226 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 CSTF3Q12996 717 aaKnown RBP12.75□□□□□ -0.37
CCDC149-201ENST00000324309 SLC8B1Q6J4K2 584 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 LINGO4Q6UY18 593 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 NRSN1Q8IZ57 195 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 TEX9Q8N6V9 391 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 ADPRHL2Q9NX46 363 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 MIOSQ9NXC5 875 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 WNT6Q9Y6F9 365 aa12.75□□□□□ -0.37
CCDC149-201ENST00000324309 CCDC154A6NI56 674 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 TTC36A6NLP5 189 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 RNF225M0QZC1 329 aaPredicted RBP12.74□□□□□ -0.37
CCDC149-201ENST00000324309 CPSF4O95639 269 aaKnown RBP12.74□□□□□ -0.37
CCDC149-201ENST00000324309 ALDH9A1P49189 494 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 AQP5P55064 265 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 PKNOX1P55347 436 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 ACAP2Q15057 778 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 SERPINA9Q86WD7 417 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 UMODL1-AS1Q8N2C9 162 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 CPXM2Q8N436 756 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 MRPL43Q8N983 215 aaKnown RBP12.74□□□□□ -0.37
CCDC149-201ENST00000324309 PPP1R36Q96LQ0 422 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 EPN2O95208 641 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 ENO2P09104 434 aaPredicted RBP12.74□□□□□ -0.37
CCDC149-201ENST00000324309 OCM2P0CE71 109 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 OCMP0CE72 109 aaPredicted RBP12.74□□□□□ -0.37
CCDC149-201ENST00000324309 HTRA3P83110 453 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 LY6G5CQ5SRR4 150 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 WLSQ5T9L3 541 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 KIAA1161Q6NSJ0 714 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 OXR1Q8N573 874 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 TRPV1Q8NER1 839 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 IRF2BPLQ9H1B7 796 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 CCDC134Q9H6E4 229 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 SEMA3GQ9NS98 782 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 ZNF232Q9UNY5 417 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 LAMA4Q16363 1823 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 RCCD1A6NED2 376 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 FAM155AB1AL88 458 aaPredicted RBP12.74□□□□□ -0.37
CCDC149-201ENST00000324309 PDE9AO76083 593 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 RPS21P63220 83 aaKnown RBP12.74□□□□□ -0.37
CCDC149-201ENST00000324309 ZNF844Q08AG5 666 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 PFKFB4Q16877 469 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 RFTN2Q52LD8 501 aaPredicted RBP12.74□□□□□ -0.37
CCDC149-201ENST00000324309 NCBP2-AS2Q69YL0 99 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 SPATA19Q7Z5L4 167 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 LRRTM4Q86VH4 590 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 TRIM69Q86WT6 500 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 FUT8Q9BYC5 575 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 ZNF780BQ9Y6R6 833 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 WDR47O94967 919 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 ETS1P14921 441 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 HNMTP50135 292 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 RPS24P62847 133 aaKnown RBP12.74□□□□□ -0.37
CCDC149-201ENST00000324309 ARSIQ5FYB1 569 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 SLC9B2Q86UD5 537 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 MIPOL1Q8TD10 442 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 BTN2A2Q8WVV5 523 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 HHATLQ9HCP6 504 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 SNX15Q9NRS6 342 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 FBXL12Q9NXK8 326 aa12.74□□□□□ -0.37
CCDC149-201ENST00000324309 KMOO15229 486 aa12.73□□□□□ -0.37
CCDC149-201ENST00000324309 HMGB3O15347 200 aaKnown RBP12.73□□□□□ -0.37
CCDC149-201ENST00000324309 TGDSO95455 350 aa12.73□□□□□ -0.37
CCDC149-201ENST00000324309 SOX4Q06945 474 aaPredicted RBP12.73□□□□□ -0.37
CCDC149-201ENST00000324309 SP140Q13342 867 aa12.73□□□□□ -0.37
CCDC149-201ENST00000324309 RTP2Q5QGT7 225 aa12.73□□□□□ -0.37
CCDC149-201ENST00000324309 MPP7Q5T2T1 576 aa12.73□□□□□ -0.37
CCDC149-201ENST00000324309 DSELQ8IZU8 1212 aa12.73□□□□□ -0.37
CCDC149-201ENST00000324309 SLC44A1Q8WWI5 657 aa12.73□□□□□ -0.37
CCDC149-201ENST00000324309 LCN9Q8WX39 176 aa12.73□□□□□ -0.37
CCDC149-201ENST00000324309 TMEM120AQ9BXJ8 343 aa12.73□□□□□ -0.37
CCDC149-201ENST00000324309 TRPC4Q9UBN4 977 aa12.73□□□□□ -0.37
CCDC149-201ENST00000324309 BRWD3Q6RI45 1802 aa12.73□□□□□ -0.37
CCDC149-201ENST00000324309 CAPZA2P47755 286 aa12.73□□□□□ -0.37
CCDC149-201ENST00000324309 AVPR1BP47901 424 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms