RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 PSMD4P55036 377 aaKnown RBP7.04□□□□□ -1.28
SMC1A-201ENST00000322213 KIAA1841Q6NSI8 718 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 TXNDC11Q6PKC3 985 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 PSTKQ8IV42 348 aaKnown RBP7.04□□□□□ -1.28
SMC1A-201ENST00000322213 ATP6V0D2Q8N8Y2 350 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 ERLEC1Q96DZ1 483 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 FRMD6Q96NE9 622 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 BCL7BQ9BQE9 202 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 DSN1Q9H410 356 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 ANKRA2Q9H9E1 313 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 KCNMB3Q9NPA1 279 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 EXD2Q9NVH0 621 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 TCRBV7S2A1N4TA0A589 114 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 H7C2Y5 167 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 ADAMDEC1O15204 470 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 RAP2AP10114 183 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 SMIM11AP58511 58 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 SLC18A2Q05940 514 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 E2F2Q14209 437 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 ZNF267Q14586 743 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-201ENST00000322213 HKDC1Q2TB90 917 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 TIGD2Q4W5G0 525 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 PTCHD4Q6ZW05 846 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 C7orf43Q8WVR3 580 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 TTYH1Q9H313 450 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-201ENST00000322213 PAK6Q9NQU5 681 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-201ENST00000322213 AASSQ9UDR5 926 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 USF3Q68DE3 2245 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 PEPDP12955 493 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 NFKB1P19838 968 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 MPSTP25325 297 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 ALDH4A1P30038 563 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 CLCN5P51795 746 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 REPS1Q96D71 796 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 FICDQ9BVA6 458 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 TOR3AQ9H497 397 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 NXF3Q9H4D5 531 aaKnown RBP7.04□□□□□ -1.28
SMC1A-201ENST00000322213 DDIT4Q9NX09 232 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 PRR12Q9ULL5 1215 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 ST3GAL5Q9UNP4 418 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 SPATA31A6Q5VVP1 1343 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 SUV39H1O43463 412 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 HNRNPLP14866 589 aaKnown RBP eCLIP7.04□□□□□ -1.28
SMC1A-201ENST00000322213 RPL7AP62424 266 aaKnown RBP7.04□□□□□ -1.28
SMC1A-201ENST00000322213 CES3Q6UWW8 571 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 DEF8Q6ZN54 512 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 CUZD1Q86UP6 607 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 ZC3H7AQ8IWR0 971 aaKnown RBP7.04□□□□□ -1.28
SMC1A-201ENST00000322213 CMTM6Q9NX76 183 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 SSX5O60225 188 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 NUAK1O60285 661 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 SLC2A2P11168 524 aaPredicted RBP7.03□□□□□ -1.28
SMC1A-201ENST00000322213 CD36P16671 472 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 SPIBQ01892 262 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 PPATQ06203 517 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 FSTL1Q12841 308 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 FAM180AQ6UWF9 173 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 ABI1Q8IZP0 508 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 METTL6Q8TCB7 284 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 TRIT1Q9H3H1 467 aaKnown RBP7.03□□□□□ -1.28
SMC1A-201ENST00000322213 PIH1D1Q9NWS0 290 aaKnown RBP7.03□□□□□ -1.28
SMC1A-201ENST00000322213 AQP12BA6NM10 295 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 SLC30A4O14863 429 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 CASKO14936 926 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 NDUFB10O96000 172 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 GDI2P50395 445 aaKnown RBP7.03□□□□□ -1.28
SMC1A-201ENST00000322213 NOTUMQ6P988 496 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 SCN4BQ8IWT1 228 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 AQP12AQ8IXF9 295 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 CHPT1Q8WUD6 406 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 GATA6Q92908 595 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 PPP3R2Q96LZ3 170 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 EIF2B3Q9NR50 452 aaKnown RBP7.03□□□□□ -1.28
SMC1A-201ENST00000322213 ZSCAN32Q9NX65 697 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 PTPRJQ12913 1337 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 ASB14A6NK59 587 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 AKAP8O43823 692 aaKnown RBP7.03□□□□□ -1.28
SMC1A-201ENST00000322213 RFPL2O75678 378 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 KLRC2P26717 231 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 TMEM62Q0P6H9 643 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 ADIGQ0VDE8 80 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 GPRIN3Q6ZVF9 776 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 C1orf186Q6ZWK4 172 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 STK40Q8N2I9 435 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 MSANTD3Q96H12 275 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 GAD1Q99259 594 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 ACOX2Q99424 681 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 TARS2Q9BW92 718 aaKnown RBP7.03□□□□□ -1.28
SMC1A-201ENST00000322213 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMC1A-201ENST00000322213 DYSFO75923 2080 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 FAM155BO75949 473 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 METTL18O95568 372 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 MYF6P23409 242 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 ETV3P41162 512 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 CDH4P55283 916 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 PEX6Q13608 980 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 ZNF621Q6ZSS3 439 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 COLGALT2Q8IYK4 626 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 RACGAP1Q9H0H5 632 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 MUC3BQ9H195 1237 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms