RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 DPPA5A6NC42 116 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 CLUP10909 449 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 NR4A1P22736 598 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 IST1P53990 364 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 TMIEQ8NEW7 156 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 OR52K2Q8NGK3 314 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 SIPA1Q96FS4 1042 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 ABCG2Q9UNQ0 655 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 TOP3BO95985 862 aaKnown RBP16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 CUZD1Q86UP6 607 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 NODALQ96S42 347 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 EDF1O60869 148 aaKnown RBP16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 GPIP06744 558 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 NELFEP18615 380 aaKnown RBP16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 RNF31Q96EP0 1072 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 MROH2AA6NES4 1674 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 FGBP02675 491 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 FGF1P05230 155 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 ABCG1P45844 678 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 FRRS1Q6ZNA5 592 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 OR4L1Q8NH43 312 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 ZNHIT2Q9UHR6 403 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 TRIM17Q9Y577 477 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 GNRH1P01148 92 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 RORCP51449 518 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 RNASE12Q5GAN4 147 aaKnown RBP16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 LRRC69Q6ZNQ3 347 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 CXorf40AQ8TE69 158 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 OMDQ99983 421 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 MID1O15344 667 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 TUBA1BP68363 451 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 TUBA1AQ71U36 451 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 CENPNQ96H22 339 aaPredicted RBP16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 FMN2Q9NZ56 1722 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 RPL22P35268 128 aaKnown RBP16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 EIF5AP63241 154 aaKnown RBP16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 HERC3Q15034 1050 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 USF2Q15853 346 aaPredicted RBP16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 OCLNQ16625 522 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 PLEKHH3Q7Z736 793 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 PLCZ1Q86YW0 608 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 ARRDC4Q8NCT1 418 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 USP31Q70CQ4 1352 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 RB1P06400 928 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 SP100P23497 879 aaPredicted RBP16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 ECHS1P30084 290 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 ATP5C1P36542 298 aaKnown RBP16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 SATL1Q86VE3 508 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 ZNF563Q8TA94 476 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 GAL3ST3Q96A11 431 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 CLIP3Q96DZ5 547 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 PREX1Q8TCU6 1659 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 IGFALSP35858 605 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 RAET1GQ6H3X3 334 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 AADACL2Q6P093 401 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 ARMC10Q8N2F6 343 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 SNIP1Q8TAD8 396 aaKnown RBP16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 ROPN1LQ96C74 230 aa16.82■□□□□ 0.28
SMCHD1-201ENST00000320876 RPLP0P05388 317 aaKnown RBP16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 LPOP22079 712 aaPredicted RBP16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 ECT2LQ008S8 904 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 PEX6Q13608 980 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 NTRK3Q16288 839 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 SLC39A12Q504Y0 691 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 OTOP1Q7RTM1 612 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 ZZZ3Q8IYH5 903 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 CNTD1Q8N815 330 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 DUSP9Q99956 384 aaKnown RBP16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 PACSIN3Q9UKS6 424 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 A8MX80 341 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 CTSEP14091 401 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 TIGD2Q4W5G0 525 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 MIIPQ5JXC2 388 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 EFHD2Q96C19 240 aaPredicted RBP16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 KLHL5Q96PQ7 755 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 GRHL1Q9NZI5 618 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 POMCP01189 267 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 RHOJQ9H4E5 214 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 DHX33Q9H6R0 707 aaKnown RBP16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 RCOR3Q9P2K3 495 aaPredicted RBP16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 NFASCO94856 1347 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 UBE2Q2LH0YL09 131 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 PDE2AO00408 941 aaPredicted RBP16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 ZBTB7AO95365 584 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 BDNFP23560 247 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 TIE1P35590 1138 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 RPS9P46781 194 aaKnown RBP16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 RARRES1P49788 294 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 PFKPQ01813 784 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 KCTD4Q8WVF5 259 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 C3orf14Q9HBI5 128 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 TP73O15350 636 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 SLITRK3O94933 977 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 PCSK2P16519 638 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 ADNP2Q6IQ32 1131 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 DNTTP04053 509 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 BPGMP07738 259 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 PPP3R1P63098 170 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 CHSY3Q70JA7 882 aa16.81■□□□□ 0.28
SMCHD1-201ENST00000320876 SPPL2CQ8IUH8 684 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms