RNA–Protein interactions for RNA: ENST00000317702.9

TUBB6-201, Transcript of tubulin beta 6 class V, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB6, Length 2,064 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-201ENST00000317702 THOP1P52888 689 aa28.39■■■□□ 2.14
TUBB6-201ENST00000317702 AARSD1Q9BTE6 412 aaKnown RBP28.39■■■□□ 2.14
TUBB6-201ENST00000317702 INTS10Q9NVR2 710 aaKnown RBP28.39■■■□□ 2.14
TUBB6-201ENST00000317702 POLR3BQ9NW08 1133 aaPredicted RBP28.39■■■□□ 2.14
TUBB6-201ENST00000317702 CFAP97Q9P2B7 532 aa28.39■■■□□ 2.14
TUBB6-201ENST00000317702 ARIH1Q9Y4X5 557 aaPredicted RBP28.39■■■□□ 2.14
TUBB6-201ENST00000317702 KIAA0100Q14667 2235 aaKnown RBP28.39■■■□□ 2.14
TUBB6-201ENST00000317702 A0A1W2PRU2 124 aa28.39■■■□□ 2.13
TUBB6-201ENST00000317702 TYW5A2RUC4 315 aaKnown RBP28.39■■■□□ 2.13
TUBB6-201ENST00000317702 CES1P23141 567 aa28.39■■■□□ 2.13
TUBB6-201ENST00000317702 HERVK_113P63132 956 aa28.39■■■□□ 2.13
TUBB6-201ENST00000317702 SLC7A9P82251 487 aa28.39■■■□□ 2.13
TUBB6-201ENST00000317702 ZNF423Q2M1K9 1284 aa28.39■■■□□ 2.13
TUBB6-201ENST00000317702 UNC50Q53HI1 259 aa28.39■■■□□ 2.13
TUBB6-201ENST00000317702 CCDC149Q6ZUS6 474 aa28.39■■■□□ 2.13
TUBB6-201ENST00000317702 LPCAT1Q8NF37 534 aa28.39■■■□□ 2.13
TUBB6-201ENST00000317702 ERVK-6Q9BXR3 956 aa28.39■■■□□ 2.13
TUBB6-201ENST00000317702 VPS51Q9UID3 782 aa28.39■■■□□ 2.13
TUBB6-201ENST00000317702 LSM7Q9UK45 103 aaKnown RBP28.39■■■□□ 2.13
TUBB6-201ENST00000317702 H3BNX3 289 aa28.38■■■□□ 2.13
TUBB6-201ENST00000317702 CFLARO15519 480 aa28.38■■■□□ 2.13
TUBB6-201ENST00000317702 ADH1AP07327 375 aa28.38■■■□□ 2.13
TUBB6-201ENST00000317702 ERVFC1P60507 584 aa28.38■■■□□ 2.13
TUBB6-201ENST00000317702 CDH18Q13634 790 aa28.38■■■□□ 2.13
TUBB6-201ENST00000317702 BBS7Q8IWZ6 715 aa28.38■■■□□ 2.13
TUBB6-201ENST00000317702 RYBPQ8N488 228 aaPredicted RBP28.38■■■□□ 2.13
TUBB6-201ENST00000317702 MDGA1Q8NFP4 955 aa28.38■■■□□ 2.13
TUBB6-201ENST00000317702 BADQ92934 168 aa28.38■■■□□ 2.13
TUBB6-201ENST00000317702 VCX3BQ9H321 246 aa28.38■■■□□ 2.13
TUBB6-201ENST00000317702 INSL6Q9Y581 213 aa28.38■■■□□ 2.13
TUBB6-201ENST00000317702 UBDO15205 165 aa28.38■■■□□ 2.13
TUBB6-201ENST00000317702 TRAF2Q12933 501 aa28.38■■■□□ 2.13
TUBB6-201ENST00000317702 PDAP1Q13442 181 aaKnown RBP28.38■■■□□ 2.13
TUBB6-201ENST00000317702 SQLEQ14534 574 aa28.38■■■□□ 2.13
TUBB6-201ENST00000317702 TMEM154Q6P9G4 183 aa28.38■■■□□ 2.13
TUBB6-201ENST00000317702 GLT6D1Q7Z4J2 308 aa28.38■■■□□ 2.13
TUBB6-201ENST00000317702 SLC22A17Q8WUG5 538 aa28.38■■■□□ 2.13
TUBB6-201ENST00000317702 TCF25Q9BQ70 676 aa28.38■■■□□ 2.13
TUBB6-201ENST00000317702 DNMT3BQ9UBC3 853 aaKnown RBP28.38■■■□□ 2.13
TUBB6-201ENST00000317702 FCF1Q9Y324 198 aaKnown RBP28.38■■■□□ 2.13
TUBB6-201ENST00000317702 TAF1AQ15573 450 aaPredicted RBP28.37■■■□□ 2.13
TUBB6-201ENST00000317702 GSTA3Q16772 222 aa28.37■■■□□ 2.13
TUBB6-201ENST00000317702 CAPRIN2Q6IMN6 1127 aaKnown RBP28.37■■■□□ 2.13
TUBB6-201ENST00000317702 NCEH1Q6PIU2 408 aa28.37■■■□□ 2.13
TUBB6-201ENST00000317702 AFTPHQ6ULP2 937 aa28.37■■■□□ 2.13
TUBB6-201ENST00000317702 GK5Q6ZS86 529 aa28.37■■■□□ 2.13
TUBB6-201ENST00000317702 HTR3DQ70Z44 454 aa28.37■■■□□ 2.13
TUBB6-201ENST00000317702 EXT2Q93063 718 aa28.37■■■□□ 2.13
TUBB6-201ENST00000317702 NPAS2Q99743 824 aa28.37■■■□□ 2.13
TUBB6-201ENST00000317702 LCHNA4D1U4 455 aa28.36■■■□□ 2.13
TUBB6-201ENST00000317702 PRSS56P0CW18 603 aa28.36■■■□□ 2.13
TUBB6-201ENST00000317702 ARSAP15289 507 aa28.36■■■□□ 2.13
TUBB6-201ENST00000317702 DPP6P42658 865 aa28.36■■■□□ 2.13
TUBB6-201ENST00000317702 PPIGQ13427 754 aaKnown RBP eCLIP28.36■■■□□ 2.13
TUBB6-201ENST00000317702 PPP1R3AQ16821 1122 aa28.36■■■□□ 2.13
TUBB6-201ENST00000317702 INO80DQ53TQ3 878 aaPredicted RBP28.36■■■□□ 2.13
TUBB6-201ENST00000317702 MFN1Q8IWA4 741 aa28.36■■■□□ 2.13
TUBB6-201ENST00000317702 APCDD1Q8J025 514 aa28.36■■■□□ 2.13
TUBB6-201ENST00000317702 OR4K2Q8NGD2 314 aa28.36■■■□□ 2.13
TUBB6-201ENST00000317702 RHEBL1Q8TAI7 183 aa28.36■■■□□ 2.13
TUBB6-201ENST00000317702 CORO1BQ9BR76 489 aa28.36■■■□□ 2.13
TUBB6-201ENST00000317702 SH3BP1Q9Y3L3 701 aa28.36■■■□□ 2.13
TUBB6-201ENST00000317702 HIDE1A8MVS5 230 aa28.36■■■□□ 2.13
TUBB6-201ENST00000317702 CCL16O15467 120 aa28.36■■■□□ 2.13
TUBB6-201ENST00000317702 TSPAN8P19075 237 aa28.36■■■□□ 2.13
TUBB6-201ENST00000317702 PKNOX1P55347 436 aa28.36■■■□□ 2.13
TUBB6-201ENST00000317702 CEACAM7Q14002 265 aa28.36■■■□□ 2.13
TUBB6-201ENST00000317702 MAPRE2Q15555 327 aa28.36■■■□□ 2.13
TUBB6-201ENST00000317702 OR4D1Q15615 310 aa28.36■■■□□ 2.13
TUBB6-201ENST00000317702 CLEC6AQ6EIG7 209 aa28.36■■■□□ 2.13
TUBB6-201ENST00000317702 PTGR2Q8N8N7 351 aaPredicted RBP28.36■■■□□ 2.13
TUBB6-201ENST00000317702 DCAF4L2Q8NA75 395 aa28.36■■■□□ 2.13
TUBB6-201ENST00000317702 GDPD5Q8WTR4 605 aa28.36■■■□□ 2.13
TUBB6-201ENST00000317702 DDI1Q8WTU0 396 aa28.36■■■□□ 2.13
TUBB6-201ENST00000317702 MRPL1Q9BYD6 325 aaKnown RBP28.36■■■□□ 2.13
TUBB6-201ENST00000317702 TRAV19A0A0A6YYK7 116 aa28.35■■■□□ 2.13
TUBB6-201ENST00000317702 CCDC189A1A4V9 331 aa28.35■■■□□ 2.13
TUBB6-201ENST00000317702 MT-CO1P00395 513 aa28.35■■■□□ 2.13
TUBB6-201ENST00000317702 XRCC1P18887 633 aaPredicted RBP28.35■■■□□ 2.13
TUBB6-201ENST00000317702 LPCAT4Q643R3 524 aa28.35■■■□□ 2.13
TUBB6-201ENST00000317702 HMGCLL1Q8TB92 370 aa28.35■■■□□ 2.13
TUBB6-201ENST00000317702 USP13Q92995 863 aaPredicted RBP28.35■■■□□ 2.13
TUBB6-201ENST00000317702 TMEM106CQ9BVX2 250 aa28.35■■■□□ 2.13
TUBB6-201ENST00000317702 KLHL4Q9C0H6 718 aa28.35■■■□□ 2.13
TUBB6-201ENST00000317702 SMG9Q9H0W8 520 aaKnown RBP28.35■■■□□ 2.13
TUBB6-201ENST00000317702 TFB2MQ9H5Q4 396 aaKnown RBP28.35■■■□□ 2.13
TUBB6-201ENST00000317702 UTP6Q9NYH9 597 aaKnown RBP28.35■■■□□ 2.13
TUBB6-201ENST00000317702 CLEC4EQ9ULY5 219 aa28.35■■■□□ 2.13
TUBB6-201ENST00000317702 UBA6A0AVT1 1052 aaPredicted RBP28.34■■■□□ 2.13
TUBB6-201ENST00000317702 H3BMM5 538 aa28.34■■■□□ 2.13
TUBB6-201ENST00000317702 GPC4O75487 556 aa28.34■■■□□ 2.13
TUBB6-201ENST00000317702 RHOAP61586 193 aa28.34■■■□□ 2.13
TUBB6-201ENST00000317702 FLOT2Q14254 428 aa28.34■■■□□ 2.13
TUBB6-201ENST00000317702 LRRC36Q1X8D7 754 aa28.34■■■□□ 2.13
TUBB6-201ENST00000317702 ATXN7L2Q5T6C5 722 aaPredicted RBP28.34■■■□□ 2.13
TUBB6-201ENST00000317702 PLPP4Q5VZY2 271 aa28.34■■■□□ 2.13
TUBB6-201ENST00000317702 RAB44Q7Z6P3 723 aaPredicted RBP28.34■■■□□ 2.13
TUBB6-201ENST00000317702 PDSS2Q86YH6 399 aa28.34■■■□□ 2.13
TUBB6-201ENST00000317702 ELMOD1Q8N336 334 aa28.34■■■□□ 2.13
TUBB6-201ENST00000317702 LPGAT1Q92604 370 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms