RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 COX14Q96I36 57 aa17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 OR2M4Q96R27 311 aa17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 TAAR9Q96RI9 348 aa17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 ARHGAP9Q9BRR9 750 aa17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 RIOK2Q9BVS4 552 aaKnown RBP17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 AKAP7Q9P0M2 348 aaPredicted RBP17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 RCOR3Q9P2K3 495 aaPredicted RBP17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 CHKBQ9Y259 395 aa17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 NBASA2RRP1 2371 aa17.36■□□□□ 0.37
EXOSC4-201ENST00000316052 INPP4BO15327 924 aa17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 ZW10O43264 779 aa17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 PBX1P40424 430 aa17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 STC1P52823 247 aa17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 NIPAL4Q0D2K0 466 aa17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 BIRC2Q13490 618 aa17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 DPYSL3Q14195 570 aa17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 PAFAH1B3Q15102 231 aaKnown RBP17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 NCBP2-AS2Q69YL0 99 aa17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 ALG1LQ6GMV1 187 aa17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 XKR5Q6UX68 686 aa17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 ZNF765Q7L2R6 523 aa17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 NDUFAF2Q8N183 169 aa17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 OR4D9Q8NGE8 314 aa17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 ARRDC2Q8TBH0 407 aa17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 SYN2Q92777 582 aaPredicted RBP17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 NKD1Q969G9 470 aa17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 FUCA2Q9BTY2 467 aa17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 POLR1EQ9GZS1 481 aaKnown RBP17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 CDH19Q9H159 772 aa17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 STARD5Q9NSY2 213 aa17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 RBM22Q9NW64 420 aaKnown RBP eCLIP17.35■□□□□ 0.372e-7■□□□□ 8.8
EXOSC4-201ENST00000316052 CNOT6Q9ULM6 557 aaKnown RBP17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 PCDHGA3Q9Y5H0 932 aa17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 B3GALT1Q9Y5Z6 326 aa17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 BZW2Q9Y6E2 419 aaKnown RBP17.35■□□□□ 0.37
EXOSC4-201ENST00000316052 STMND1H3BQB6 276 aa17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 MYO1FO00160 1098 aa17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 MATN3O15232 486 aa17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 CLDN7O95471 211 aa17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 SERPING1P05155 500 aa17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 THRAP10827 490 aa17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 ZNF30P17039 623 aa17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 SSR1P43307 286 aaKnown RBP17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 EPHB1P54762 984 aa17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 NFKB2Q00653 900 aa17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 PTPN13Q12923 2485 aa17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 TRA2AQ13595 282 aaKnown RBP eCLIP17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 PEX6Q13608 980 aa17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 CCDC122Q5T0U0 273 aa17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 PRICKLE2Q7Z3G6 844 aa17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 NRSN1Q8IZ57 195 aa17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 ZSCAN1Q8NBB4 408 aa17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 CPLX3Q8WVH0 158 aa17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 ART4Q93070 314 aa17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 WDR24Q96S15 920 aa17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 TDRD1Q9BXT4 1180 aaKnown RBP17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 OCIAD1Q9NX40 245 aa17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 KCNK4Q9NYG8 393 aa17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 PRKAB1Q9Y478 270 aa17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 OAS3Q9Y6K5 1087 aaKnown RBP17.34■□□□□ 0.37
EXOSC4-201ENST00000316052 A0A1W2PQJ5 194 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 DNAJC6O75061 913 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 WISP1O95388 367 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 ATP1A1P05023 1023 aaKnown RBP17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 CES1P23141 567 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 FASLGP48023 281 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 KCNC4Q03721 635 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 SLC10A2Q12908 348 aaPredicted RBP17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 CLCA4Q14CN2 919 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 NFKBIBQ15653 356 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 IFI16Q16666 785 aaKnown RBP17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 ANKRD20A8PQ5CZ79 823 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 FAM182AQ5T1J6 154 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 CAVIN1Q6NZI2 390 aaKnown RBP17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 TMEM71Q6P5X7 295 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 GALNT13Q8IUC8 556 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 SFRP1Q8N474 314 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 AGBL5Q8NDL9 886 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 EXD1Q8NHP7 514 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 SLC37A2Q8TED4 501 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 FATE1Q969F0 183 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 TSGA13Q96PP4 275 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 SLC12A9Q9BXP2 914 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 FAM117AQ9C073 453 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 CLMPQ9H6B4 373 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 PDP2Q9P2J9 529 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 ZNHIT2Q9UHR6 403 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 TTLL3Q9Y4R7 772 aa17.33■□□□□ 0.36
EXOSC4-201ENST00000316052 ASMTLO95671 621 aa17.32■□□□□ 0.36
EXOSC4-201ENST00000316052 HLA-DQB2P05538 268 aa17.32■□□□□ 0.36
EXOSC4-201ENST00000316052 CCNCP24863 283 aa17.32■□□□□ 0.36
EXOSC4-201ENST00000316052 CSTF2P33240 577 aaKnown RBP eCLIP17.32■□□□□ 0.36
EXOSC4-201ENST00000316052 UGT1A3P35503 534 aa17.32■□□□□ 0.36
EXOSC4-201ENST00000316052 GJC1P36383 396 aa17.32■□□□□ 0.36
EXOSC4-201ENST00000316052 TAS2R40P59535 323 aa17.32■□□□□ 0.36
EXOSC4-201ENST00000316052 ZBED6P86452 979 aa17.32■□□□□ 0.36
EXOSC4-201ENST00000316052 FANCCQ00597 558 aa17.32■□□□□ 0.36
EXOSC4-201ENST00000316052 GBE1Q04446 702 aa17.32■□□□□ 0.36
EXOSC4-201ENST00000316052 HADHQ16836 314 aaKnown RBP17.32■□□□□ 0.36
EXOSC4-201ENST00000316052 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms