RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 NEFHP12036 1026 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 P4HA1P13674 534 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 GNL1P36915 607 aaPredicted RBP7.81□□□□□ -1.16
CNOT4-201ENST00000315544 RGRP47804 291 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 SGSHP51688 502 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 ALDH18A1P54886 795 aaKnown RBP7.81□□□□□ -1.16
CNOT4-201ENST00000315544 UBE3AQ05086 875 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 PDK1Q15118 436 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 PAGE3Q5JUK9 113 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 BRMS1LQ5PSV4 323 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 NANOGP8Q6NSW7 305 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 ZFP1Q6P2D0 407 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 NOTUMQ6P988 496 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 KIAA0907Q7Z7F0 614 aaPredicted RBP7.81□□□□□ -1.16
CNOT4-201ENST00000315544 NPAS4Q8IUM7 802 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 HM13Q8TCT9 377 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 KCTD4Q8WVF5 259 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 ROPN1LQ96C74 230 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 SPATA17Q96L03 361 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 MRPL57Q9BQC6 102 aaKnown RBP7.81□□□□□ -1.16
CNOT4-201ENST00000315544 THTPAQ9BU02 230 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 CALN1Q9BXU9 219 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 ULBP1Q9BZM6 244 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 S1PR5Q9H228 398 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 ACSS2Q9NR19 701 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 CDYLQ9Y232 598 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 PTGDR2Q9Y5Y4 395 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 NEMP2A6NFY4 417 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 GJB5O95377 273 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 TBX6O95947 436 aaPredicted RBP7.81□□□□□ -1.16
CNOT4-201ENST00000315544 CYP2C18P33260 490 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 OSTNP61366 133 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 SERINC3Q13530 473 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 ALFQ53S48 1182 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 HHATQ5VTY9 493 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 AP1ARQ63HQ0 302 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 CXCL17Q6UXB2 119 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 LINC00299Q6ZSB3 139 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 STRA8Q7Z7C7 330 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 SCAMP5Q8TAC9 235 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 APH1BQ8WW43 257 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 USP7Q93009 1102 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 C8orf48Q96LL4 319 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 NEURL2Q9BR09 285 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 TRPC7Q9HCX4 862 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 SPATS2LQ9NUQ6 558 aaKnown RBP7.81□□□□□ -1.16
CNOT4-201ENST00000315544 AIG1Q9NVV5 245 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 ELOVL2Q9NXB9 296 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 MAN2B2Q9Y2E5 1009 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 CORINQ9Y5Q5 1042 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 EXPH5Q8NEV8 1989 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 ARHGAP10A1A4S6 786 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 ENPP3O14638 875 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 NPC1O15118 1278 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 SEC14L5O43304 696 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 DDHD2O94830 711 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 PRDX3P30048 256 aaKnown RBP7.81□□□□□ -1.16
CNOT4-201ENST00000315544 GAS1P54826 345 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 EMX2Q04743 252 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 EEF1A2Q05639 463 aaKnown RBP7.81□□□□□ -1.16
CNOT4-201ENST00000315544 SIRPB2Q5JXA9 342 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 TRIM46Q7Z4K8 759 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 DHX37Q8IY37 1157 aaKnown RBP7.81□□□□□ -1.16
CNOT4-201ENST00000315544 YIPF6Q96EC8 236 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 MAGEE1Q9HCI5 957 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 CXXC1Q9P0U4 656 aaPredicted RBP7.81□□□□□ -1.16
CNOT4-201ENST00000315544 MBD1Q9UIS9 605 aaPredicted RBP7.81□□□□□ -1.16
CNOT4-201ENST00000315544 MAFFQ9ULX9 164 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 TRIOO75962 3097 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 COL6A3P12111 3177 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 A0A087X1B8 175 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 CCDC85CA6NKD9 419 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 H0Y3Z8 333 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 YY2O15391 372 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 SMAD6O43541 496 aaKnown RBP7.8□□□□□ -1.16
CNOT4-201ENST00000315544 TLL1O43897 1013 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 VAPBO95292 243 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 EOMESO95936 686 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 ZBED1O96006 694 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 POLBP06746 335 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 JUNDP17535 347 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 FGFR3P22607 806 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 MAGEA11P43364 429 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 SUZ12Q15022 739 aaKnown RBP7.8□□□□□ -1.16
CNOT4-201ENST00000315544 TRIP4Q15650 581 aaPredicted RBP7.8□□□□□ -1.16
CNOT4-201ENST00000315544 MLIPQ5VWP3 458 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 GSTA5Q7RTV2 222 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 SGCDQ92629 289 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 WBP2Q969T9 261 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 ATP6V1E2Q96A05 226 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 LRGUKQ96M69 825 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 ZNF583Q96ND8 569 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 TMEM175Q9BSA9 504 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 SLC25A51Q9H1U9 297 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 GORASP2Q9H8Y8 452 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 GPN2Q9H9Y4 310 aaPredicted RBP7.8□□□□□ -1.16
CNOT4-201ENST00000315544 UTS2RQ9UKP6 389 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 PACSIN3Q9UKS6 424 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 SPO11Q9Y5K1 396 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 MTCH2Q9Y6C9 303 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms