RNA–Protein interactions for RNA: ENST00000312912.9

KDM3A-201, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-201ENST00000312912 PRDX6P30041 224 aa15.32■□□□□ 0.04
KDM3A-201ENST00000312912 TUSC3Q13454 348 aa15.32■□□□□ 0.04
KDM3A-201ENST00000312912 NIPAL1Q6NVV3 410 aa15.32■□□□□ 0.04
KDM3A-201ENST00000312912 OR2T12Q8NG77 320 aa15.32■□□□□ 0.04
KDM3A-201ENST00000312912 PHF10Q8WUB8 498 aaKnown RBP15.32■□□□□ 0.04
KDM3A-201ENST00000312912 ZDHHC6Q9H6R6 413 aa15.32■□□□□ 0.04
KDM3A-201ENST00000312912 ZNHIT2Q9UHR6 403 aa15.32■□□□□ 0.04
KDM3A-201ENST00000312912 OR6C75A6NL08 312 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 PRMT5O14744 637 aaPredicted RBP15.31■□□□□ 0.04
KDM3A-201ENST00000312912 PQBP1O60828 265 aaKnown RBP15.31■□□□□ 0.04
KDM3A-201ENST00000312912 IFNA16P05015 189 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 DBTP11182 482 aaKnown RBP15.31■□□□□ 0.04
KDM3A-201ENST00000312912 YBEYP58557 167 aaPredicted RBP15.31■□□□□ 0.04
KDM3A-201ENST00000312912 ARL13AQ5H913 290 aaPredicted RBP15.31■□□□□ 0.04
KDM3A-201ENST00000312912 TPGS1Q6ZTW0 290 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 PAGE2Q7Z2X7 111 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 PPTC7Q8NI37 304 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 C1QTNF7Q9BXJ2 289 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 NFKBIZQ9BYH8 718 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 SLITRK2Q9H156 845 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 PFDN2Q9UHV9 154 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 GNEQ9Y223 722 aaKnown RBP15.31■□□□□ 0.04
KDM3A-201ENST00000312912 A0A0G2JPF8 293 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 HNRNPCL3B7ZW38 293 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 HNRNPCL4P0DMR1 293 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 MAP2K5Q13163 448 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 PPM1LQ5SGD2 360 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 CYP20A1Q6UW02 462 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 DENND1CQ8IV53 801 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 CCDC28AQ8IWP9 274 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 CPSF7Q8N684 471 aaKnown RBP15.31■□□□□ 0.04
KDM3A-201ENST00000312912 OR8H1Q8NGG4 311 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 FAIM2Q9BWQ8 316 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 MUC13Q9H3R2 512 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 BPIFA1Q9NP55 256 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 SIX2Q9NPC8 291 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 PCDHB9Q9Y5E1 797 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 MFSD11O43934 449 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 GSTM5P46439 218 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 ANKRD22Q5VYY1 191 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 TRIM40Q6P9F5 258 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 R3HCC1LQ7Z5L2 792 aaKnown RBP15.31■□□□□ 0.04
KDM3A-201ENST00000312912 KLRG1Q96E93 195 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 NSMCE3Q96MG7 304 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 CXorf21Q9HAI6 301 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 KLHL1Q9NR64 748 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 TCEA3O75764 348 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 FYNP06241 537 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 PKMP14618 531 aaKnown RBP15.31■□□□□ 0.04
KDM3A-201ENST00000312912 TNNI3P19429 210 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 ITIH1P19827 911 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 ITGAXP20702 1163 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 PFKPQ01813 784 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 DUSP28Q4G0W2 176 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 LBX2Q6XYB7 198 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 CACTIN-AS1Q8N1I8 211 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 SUSD6Q92537 303 aa15.31■□□□□ 0.04
KDM3A-201ENST00000312912 ICAM3P32942 547 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 SLC9A3P48764 834 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 CDK9P50750 372 aaKnown RBP15.3■□□□□ 0.04
KDM3A-201ENST00000312912 HECTD2Q5U5R9 776 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 VSTM1Q6UX27 236 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 NETO2Q8NC67 525 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 SPPL2BQ8TCT7 592 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 CHRAC1Q9NRG0 131 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 ZNF806P0C7X5 589 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 ACADMP11310 421 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 BTN2A3PQ96KV6 586 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 EBF3Q9H4W6 596 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 MRPL17Q9NRX2 175 aaKnown RBP15.3■□□□□ 0.04
KDM3A-201ENST00000312912 PLIN4Q96Q06 1357 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 C3P01024 1663 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 MC4RP32245 332 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 MSX2P35548 267 aaPredicted RBP15.3■□□□□ 0.04
KDM3A-201ENST00000312912 SMAD3P84022 425 aaKnown RBP15.3■□□□□ 0.04
KDM3A-201ENST00000312912 PMF1Q6P1K2 205 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 KLHDC10Q6PID8 442 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 ZC3H7AQ8IWR0 971 aaKnown RBP15.3■□□□□ 0.04
KDM3A-201ENST00000312912 OR2T34Q8NGX1 318 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 OR2T3Q8NH03 318 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 FAR1Q8WVX9 515 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 UPF1Q92900 1129 aaKnown RBP eCLIP15.3■□□□□ 0.04
KDM3A-201ENST00000312912 EFHD2Q96C19 240 aaPredicted RBP15.3■□□□□ 0.04
KDM3A-201ENST00000312912 PPP1R16AQ96I34 528 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 EXOC2Q96KP1 924 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 KLHL5Q96PQ7 755 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 PNPLA8Q9NP80 782 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 ARHGEF4Q9NR80 690 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 TRMT13Q9NUP7 481 aaKnown RBP15.3■□□□□ 0.04
KDM3A-201ENST00000312912 ZSCAN32Q9NX65 697 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 MLXQ9UH92 298 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 VPS4AQ9UN37 437 aa15.3■□□□□ 0.04
KDM3A-201ENST00000312912 IGKV6D-41A0A0C4DH26 115 aa15.29■□□□□ 0.04
KDM3A-201ENST00000312912 NELFEP18615 380 aaKnown RBP15.29■□□□□ 0.04
KDM3A-201ENST00000312912 WARSP23381 471 aaKnown RBP15.29■□□□□ 0.04
KDM3A-201ENST00000312912 PTSQ03393 145 aa15.29■□□□□ 0.04
KDM3A-201ENST00000312912 SMARCB1Q12824 385 aa15.29■□□□□ 0.04
KDM3A-201ENST00000312912 DLG2Q15700 870 aa15.29■□□□□ 0.04
KDM3A-201ENST00000312912 ZSWIM7Q19AV6 140 aa15.29■□□□□ 0.04
KDM3A-201ENST00000312912 SH3D19Q5HYK7 790 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms