RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 CERCAMQ5T4B2 595 aa13.65□□□□□ -0.23
CLCN6-201ENST00000312413 IRAK1BP1Q5VVH5 260 aa13.65□□□□□ -0.23
CLCN6-201ENST00000312413 ULK3Q6PHR2 472 aa13.65□□□□□ -0.23
CLCN6-201ENST00000312413 TPGS1Q6ZTW0 290 aa13.65□□□□□ -0.23
CLCN6-201ENST00000312413 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.65□□□□□ -0.23
CLCN6-201ENST00000312413 RAB2BQ8WUD1 216 aa13.65□□□□□ -0.23
CLCN6-201ENST00000312413 TAMM41Q96BW9 452 aa13.65□□□□□ -0.23
CLCN6-201ENST00000312413 TM6SF2Q9BZW4 377 aa13.65□□□□□ -0.23
CLCN6-201ENST00000312413 BRD9Q9H8M2 597 aa13.65□□□□□ -0.23
CLCN6-201ENST00000312413 SSU72Q9NP77 194 aaKnown RBP13.65□□□□□ -0.23
CLCN6-201ENST00000312413 PDE10AQ9Y233 779 aa13.65□□□□□ -0.23
CLCN6-201ENST00000312413 PPP2R3BQ9Y5P8 575 aa13.65□□□□□ -0.23
CLCN6-201ENST00000312413 CYP3A7-CYP3A51PA0A087WV96 503 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 URADA6NGE7 173 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 PRMT5O14744 637 aaPredicted RBP13.64□□□□□ -0.23
CLCN6-201ENST00000312413 DNAJA2O60884 412 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 TRBC1P01850 177 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 CYP3A7P24462 503 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 MMP14P50281 582 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 ABRQ12979 859 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 E2F2Q14209 437 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 GRB14Q14449 540 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 SNAPC1Q16533 368 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 ADGRG2Q8IZP9 1017 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 RBM7Q9Y580 266 aaKnown RBP13.64□□□□□ -0.23
CLCN6-201ENST00000312413 PRODHO43272 600 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 TULP3O75386 442 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 FAM155BO75949 473 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 PSEN1P49768 467 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 MANFP55145 182 aaKnown RBP13.64□□□□□ -0.23
CLCN6-201ENST00000312413 PABPC1LQ4VXU2 614 aaKnown RBP13.64□□□□□ -0.23
CLCN6-201ENST00000312413 LRTOMTQ8WZ04 291 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 TMCO6Q96DC7 493 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 DNMT3LQ9UJW3 386 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 TNFRSF11BO00300 401 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 SCGNO76038 276 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 FGBP02675 491 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 PGRP06401 933 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 FESP07332 822 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 CSH1P0DML2 217 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 CSH2P0DML3 217 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 MC4RP32245 332 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 AP3S2P59780 193 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 RGS1Q08116 209 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 NBPF12Q5TAG4 269 aaPredicted RBP13.64□□□□□ -0.23
CLCN6-201ENST00000312413 KCTD8Q6ZWB6 473 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 TMEM139Q8IV31 216 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 OR5B17Q8NGF7 314 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 CLHC1Q8NHS4 586 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 TNFAIP8L1Q8WVP5 186 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 SUSD6Q92537 303 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 DNAJC1Q96KC8 554 aaKnown RBP13.64□□□□□ -0.23
CLCN6-201ENST00000312413 ZNF354BQ96LW1 612 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 COPS8Q99627 209 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 GPATCH1Q9BRR8 931 aaKnown RBP13.64□□□□□ -0.23
CLCN6-201ENST00000312413 ALG2Q9H553 416 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 LGALS13Q9UHV8 139 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 GRIP1Q9Y3R0 1128 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 SPATA31A1Q5TZJ5 1347 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 ORC5O43913 435 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 ATN1P54259 1190 aaPredicted RBP13.64□□□□□ -0.23
CLCN6-201ENST00000312413 AQP4P55087 323 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 CDH4P55283 916 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 ACTR3P61158 418 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 TWIST2Q8WVJ9 160 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 CLP1Q92989 425 aaKnown RBP13.64□□□□□ -0.23
CLCN6-201ENST00000312413 CCDC115Q96NT0 180 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 FCRL4Q96PJ5 515 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 COPS4Q9BT78 406 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 KAT8Q9H7Z6 458 aaKnown RBP13.64□□□□□ -0.23
CLCN6-201ENST00000312413 LRTM1Q9HBL6 345 aa13.64□□□□□ -0.23
CLCN6-201ENST00000312413 OR14I1A6ND48 311 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 FADS2P1A8MWK0 482 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 CES1P23141 567 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 ARFIP1P53367 373 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 AIF1P55008 147 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 MBTD1Q05BQ5 628 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 ARL13AQ5H913 290 aaPredicted RBP13.63□□□□□ -0.23
CLCN6-201ENST00000312413 HECTD3Q5T447 861 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 REP15Q6BDI9 236 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 FAM35AQ86V20 835 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 CACUL1Q86Y37 369 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 LRRC20Q8TCA0 184 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 EBF3Q9H4W6 596 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.63□□□□□ -0.23
CLCN6-201ENST00000312413 TRPS1Q9UHF7 1281 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 NCKAP1Q9Y2A7 1128 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 TRPV2Q9Y5S1 764 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 RNF225M0QZC1 329 aaPredicted RBP13.63□□□□□ -0.23
CLCN6-201ENST00000312413 TSPAN4O14817 238 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 MPZL2O60487 215 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 CDC40O60508 579 aaKnown RBP eCLIP13.63□□□□□ -0.23
CLCN6-201ENST00000312413 TRIM3O75382 744 aaPredicted RBP13.63□□□□□ -0.23
CLCN6-201ENST00000312413 GPR1P46091 355 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 ALDH3A2P51648 485 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 RAPSNQ13702 412 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 IL17AQ16552 155 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 CNPY1Q3B7I2 92 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 VWA5B1Q5TIE3 1220 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 CXorf40AQ8TE69 158 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms