RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 PNPOQ9NVS9 261 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 NCDNQ9UBB6 729 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 OPTCQ9UBM4 332 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 TRHDEQ9UKU6 1024 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 RAP2CQ9Y3L5 183 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 A0A0X1KG70 313 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 A0A1W2PPM1 405 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 C2orf71A6NGG8 1288 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 TRIM64CA6NLI5 447 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 HACD1B0YJ81 288 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 APOC4-APOC2K7ER74 178 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 TOP3BO95985 862 aaKnown RBP8.17□□□□□ -1.1
VPS41-202ENST00000310301 HLA-DQA2P01906 255 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 APOC2P02655 101 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 RLN1P04808 185 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 ATF6P18850 670 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 RENBPP51606 427 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 CYP4F8P98187 520 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 SCRN3Q0VDG4 424 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 MAPKAPK3Q16644 382 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 HKDC1Q2TB90 917 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 INTS11Q5TA45 600 aaKnown RBP8.17□□□□□ -1.1
VPS41-202ENST00000310301 MARC1Q5VT66 337 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 ULK3Q6PHR2 472 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 PTCHD4Q6ZW05 846 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 FAM220AQ7Z4H9 259 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 UBE2Q1Q7Z7E8 422 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 C10orf107Q8IVU9 208 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 GALNT15Q8N3T1 639 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 ZNF606Q8WXB4 792 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 ZIC5Q96T25 663 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 CDH19Q9H159 772 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 SMPD4Q9NXE4 827 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 KLQ9UEF7 1012 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 CD207Q9UJ71 328 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 GNPTGQ9UJJ9 305 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 TBC1D24Q9ULP9 559 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.17□□□□□ -1.1
VPS41-202ENST00000310301 BTRCQ9Y297 605 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 POLR1DQ9Y2S0 133 aa8.17□□□□□ -1.1
VPS41-202ENST00000310301 MDM4O15151 490 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 PIAS1O75925 651 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 C22orf31O95567 290 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 BMPR1AP36894 532 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 TKTL1P51854 596 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 RHOAP61586 193 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 MADCAM1Q13477 382 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 CHPFQ8IZ52 775 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 C12orf50Q8NA57 414 aaPredicted RBP8.16□□□□□ -1.1
VPS41-202ENST00000310301 ZNF384Q8TF68 577 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 HERVK_113Q902F9 699 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 VCPIP1Q96JH7 1222 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 DNAJC1Q96KC8 554 aaKnown RBP8.16□□□□□ -1.1
VPS41-202ENST00000310301 FAM129BQ96TA1 746 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 TPK1Q9H3S4 243 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 EXD2Q9NVH0 621 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 TBC1D30Q9Y2I9 924 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 ABCA3Q99758 1704 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 CLDN25C9JDP6 229 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 HDAC3O15379 428 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 UGT2B11O75310 529 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 TM7SF2O76062 418 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 TGM3Q08188 693 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 KCTD19Q17RG1 926 aaPredicted RBP8.16□□□□□ -1.1
VPS41-202ENST00000310301 TMEM119Q4V9L6 283 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 GALNT5Q7Z7M9 940 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 OR52L1Q8NGH7 329 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 PHF10Q8WUB8 498 aaKnown RBP8.16□□□□□ -1.1
VPS41-202ENST00000310301 PIH1D2Q8WWB5 315 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 IRF7Q92985 503 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 KAT5Q92993 513 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 MTMR9Q96QG7 549 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 GFM1Q96RP9 751 aaKnown RBP8.16□□□□□ -1.1
VPS41-202ENST00000310301 FKBP14Q9NWM8 211 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 DEC1Q9P2X7 70 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 CDH22Q9UJ99 828 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 DHRS7Q9Y394 339 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 RCCD1A6NED2 376 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 KCNK1O00180 336 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 MAN2B1O00754 1011 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 LIASO43766 372 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 SIN3BO75182 1162 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 AP2A2O94973 939 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 ITGA2P17301 1181 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 PTPN1P18031 435 aaKnown RBP8.16□□□□□ -1.1
VPS41-202ENST00000310301 TSPAN8P19075 237 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 SLC7A2P52569 658 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 OLR1P78380 273 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 ZNF268Q14587 947 aaPredicted RBP8.16□□□□□ -1.1
VPS41-202ENST00000310301 LCN1P1Q5VSP4 162 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 NPNTQ6UXI9 565 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 CLNKQ7Z7G1 428 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 ALLCQ8N6M5 410 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 DIRAS2Q96HU8 199 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 COL20A1Q9P218 1284 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 SLC17A7Q9P2U7 560 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 CLEC4AQ9UMR7 237 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 PLCL2Q9UPR0 1127 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 PRKAB1Q9Y478 270 aa8.16□□□□□ -1.1
VPS41-202ENST00000310301 A0A0G2JPF8 293 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms