RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 GALNT3Q14435 633 aa19.42■□□□□ 0.7
LIME1-201ENST00000309546 ARHGAP40Q5TG30 622 aa19.42■□□□□ 0.7
LIME1-201ENST00000309546 SLC9A4Q6AI14 798 aa19.42■□□□□ 0.7
LIME1-201ENST00000309546 NRSN1Q8IZ57 195 aa19.42■□□□□ 0.7
LIME1-201ENST00000309546 CNTD1Q8N815 330 aa19.42■□□□□ 0.7
LIME1-201ENST00000309546 PATE1Q8WXA2 126 aa19.42■□□□□ 0.7
LIME1-201ENST00000309546 DPH1Q9BZG8 443 aa19.42■□□□□ 0.7
LIME1-201ENST00000309546 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.42■□□□□ 0.7
LIME1-201ENST00000309546 PISDQ9UG56 409 aa19.42■□□□□ 0.7
LIME1-201ENST00000309546 RPL26L1Q9UNX3 145 aaKnown RBP19.42■□□□□ 0.7
LIME1-201ENST00000309546 LOXL2Q9Y4K0 774 aa19.42■□□□□ 0.7
LIME1-201ENST00000309546 ST14Q9Y5Y6 855 aa19.42■□□□□ 0.7
LIME1-201ENST00000309546 TEX51A0A1B0GUA7 166 aa19.41■□□□□ 0.7
LIME1-201ENST00000309546 ZNF487B1APH4 448 aa19.41■□□□□ 0.7
LIME1-201ENST00000309546 PPP1R12AO14974 1030 aaPredicted RBP19.41■□□□□ 0.7
LIME1-201ENST00000309546 SPOPO43791 374 aa19.41■□□□□ 0.7
LIME1-201ENST00000309546 SLC4A1P02730 911 aa19.41■□□□□ 0.7
LIME1-201ENST00000309546 SKOR1P84550 965 aa19.41■□□□□ 0.7
LIME1-201ENST00000309546 PDK1Q15118 436 aa19.41■□□□□ 0.7
LIME1-201ENST00000309546 QPCTQ16769 361 aa19.41■□□□□ 0.7
LIME1-201ENST00000309546 PHF19Q5T6S3 580 aa19.41■□□□□ 0.7
LIME1-201ENST00000309546 B4GALNT4Q76KP1 1039 aa19.41■□□□□ 0.7
LIME1-201ENST00000309546 CLEC14AQ86T13 490 aa19.41■□□□□ 0.7
LIME1-201ENST00000309546 GALNT13Q8IUC8 556 aa19.41■□□□□ 0.7
LIME1-201ENST00000309546 RHOT1Q8IXI2 618 aa19.41■□□□□ 0.7
LIME1-201ENST00000309546 EXD1Q8NHP7 514 aa19.41■□□□□ 0.7
LIME1-201ENST00000309546 CCDC97Q96F63 343 aaPredicted RBP19.41■□□□□ 0.7
LIME1-201ENST00000309546 AGAP3Q96P47 875 aa19.41■□□□□ 0.7
LIME1-201ENST00000309546 LYSMD1Q96S90 227 aa19.41■□□□□ 0.7
LIME1-201ENST00000309546 MLPHQ9BV36 600 aaPredicted RBP19.41■□□□□ 0.7
LIME1-201ENST00000309546 RDH14Q9HBH5 336 aa19.41■□□□□ 0.7
LIME1-201ENST00000309546 PKD2L2Q9NZM6 624 aa19.41■□□□□ 0.7
LIME1-201ENST00000309546 ATRXP46100 2492 aa19.4■□□□□ 0.7
LIME1-201ENST00000309546 ZFXP17010 805 aaPredicted RBP19.4■□□□□ 0.7
LIME1-201ENST00000309546 SLC5A2P31639 672 aa19.4■□□□□ 0.7
LIME1-201ENST00000309546 SLC1A1P43005 524 aa19.4■□□□□ 0.7
LIME1-201ENST00000309546 OR1D5P58170 312 aa19.4■□□□□ 0.7
LIME1-201ENST00000309546 B4GALNT1Q00973 533 aa19.4■□□□□ 0.7
LIME1-201ENST00000309546 PEX6Q13608 980 aa19.4■□□□□ 0.7
LIME1-201ENST00000309546 TMPRSS9Q7Z410 1059 aa19.4■□□□□ 0.7
LIME1-201ENST00000309546 KDELC2Q7Z4H8 507 aa19.4■□□□□ 0.7
LIME1-201ENST00000309546 VSIG1Q86XK7 387 aa19.4■□□□□ 0.7
LIME1-201ENST00000309546 NAGSQ8N159 534 aa19.4■□□□□ 0.7
LIME1-201ENST00000309546 CCHCR1Q8TD31 782 aa19.4■□□□□ 0.7
LIME1-201ENST00000309546 SLC39A7Q92504 469 aa19.4■□□□□ 0.7
LIME1-201ENST00000309546 ADGRE3Q9BY15 652 aa19.4■□□□□ 0.7
LIME1-201ENST00000309546 DDX56Q9NY93 547 aaKnown RBP19.4■□□□□ 0.7
LIME1-201ENST00000309546 BPTFQ12830 3046 aa19.39■□□□□ 0.69
LIME1-201ENST00000309546 ANKRD66B4E2M5 251 aa19.39■□□□□ 0.69
LIME1-201ENST00000309546 ATXN7O15265 892 aaPredicted RBP19.39■□□□□ 0.69
LIME1-201ENST00000309546 PRB1P04280 392 aa19.39■□□□□ 0.69
LIME1-201ENST00000309546 ATP1A1P05023 1023 aaKnown RBP19.39■□□□□ 0.69
LIME1-201ENST00000309546 ITIH1P19827 911 aa19.39■□□□□ 0.69
LIME1-201ENST00000309546 COMTP21964 271 aa19.39■□□□□ 0.69
LIME1-201ENST00000309546 SPINT3P49223 89 aa19.39■□□□□ 0.69
LIME1-201ENST00000309546 PCSK7Q16549 785 aa19.39■□□□□ 0.69
LIME1-201ENST00000309546 PYCR3Q53H96 274 aa19.39■□□□□ 0.69
LIME1-201ENST00000309546 LRRC38Q5VT99 294 aa19.39■□□□□ 0.69
LIME1-201ENST00000309546 USP53Q70EK8 1073 aa19.39■□□□□ 0.69
LIME1-201ENST00000309546 LYSMD3Q7Z3D4 306 aa19.39■□□□□ 0.69
LIME1-201ENST00000309546 NLRP8Q86W28 1048 aa19.39■□□□□ 0.69
LIME1-201ENST00000309546 C17orf82Q86X59 251 aaPredicted RBP19.39■□□□□ 0.69
LIME1-201ENST00000309546 SCARF2Q96GP6 870 aaPredicted RBP19.39■□□□□ 0.69
LIME1-201ENST00000309546 COX14Q96I36 57 aa19.39■□□□□ 0.69
LIME1-201ENST00000309546 OLFM3Q96PB7 478 aa19.39■□□□□ 0.69
LIME1-201ENST00000309546 ZMYND15Q9H091 742 aa19.39■□□□□ 0.69
LIME1-201ENST00000309546 SEMA6CQ9H3T2 930 aa19.39■□□□□ 0.69
LIME1-201ENST00000309546 FAM83DQ9H4H8 585 aa19.39■□□□□ 0.69
LIME1-201ENST00000309546 ZNHIT2Q9UHR6 403 aa19.39■□□□□ 0.69
LIME1-201ENST00000309546 INTUQ9ULD6 942 aa19.39■□□□□ 0.69
LIME1-201ENST00000309546 PRKAB1Q9Y478 270 aa19.39■□□□□ 0.69
LIME1-201ENST00000309546 ZW10O43264 779 aa19.38■□□□□ 0.69
LIME1-201ENST00000309546 B4GAT1O43505 415 aa19.38■□□□□ 0.69
LIME1-201ENST00000309546 CPNE6O95741 557 aa19.38■□□□□ 0.69
LIME1-201ENST00000309546 PIRTP0C851 137 aa19.38■□□□□ 0.69
LIME1-201ENST00000309546 NOP2P46087 812 aaKnown RBP19.38■□□□□ 0.69
LIME1-201ENST00000309546 PPM1FP49593 454 aaPredicted RBP19.38■□□□□ 0.69
LIME1-201ENST00000309546 ZFP36L1Q07352 338 aaKnown RBP19.38■□□□□ 0.69
LIME1-201ENST00000309546 TBX2Q13207 712 aaPredicted RBP19.38■□□□□ 0.69
LIME1-201ENST00000309546 CLN3Q13286 438 aa19.38■□□□□ 0.69
LIME1-201ENST00000309546 LLGL1Q15334 1064 aa19.38■□□□□ 0.69
LIME1-201ENST00000309546 MFSD7Q6UXD7 560 aa19.38■□□□□ 0.69
LIME1-201ENST00000309546 ZNF438Q7Z4V0 828 aa19.38■□□□□ 0.69
LIME1-201ENST00000309546 NT5DC3Q86UY8 548 aa19.38■□□□□ 0.69
LIME1-201ENST00000309546 PIM3Q86V86 326 aa19.38■□□□□ 0.69
LIME1-201ENST00000309546 SLITRK4Q8IW52 837 aa19.38■□□□□ 0.69
LIME1-201ENST00000309546 WDR24Q96S15 920 aa19.38■□□□□ 0.69
LIME1-201ENST00000309546 CMKLR1Q99788 373 aa19.38■□□□□ 0.69
LIME1-201ENST00000309546 NUDT22Q9BRQ3 303 aa19.38■□□□□ 0.69
LIME1-201ENST00000309546 TRIM5Q9C035 493 aa19.38■□□□□ 0.69
LIME1-201ENST00000309546 BRD8Q9H0E9 1235 aa19.38■□□□□ 0.69
LIME1-201ENST00000309546 PCDHGA7Q9Y5G6 932 aa19.38■□□□□ 0.69
LIME1-201ENST00000309546 OAS3Q9Y6K5 1087 aaKnown RBP19.38■□□□□ 0.69
LIME1-201ENST00000309546 TRBV23OR9-2A0A075B6M9 112 aa19.37■□□□□ 0.69
LIME1-201ENST00000309546 FADS2P1A8MWK0 482 aa19.37■□□□□ 0.69
LIME1-201ENST00000309546 MAPK10P53779 464 aa19.37■□□□□ 0.69
LIME1-201ENST00000309546 VAC14Q08AM6 782 aa19.37■□□□□ 0.69
LIME1-201ENST00000309546 HENMT1Q5T8I9 393 aaKnown RBP19.37■□□□□ 0.69
LIME1-201ENST00000309546 ALS2CLQ60I27 953 aa19.37■□□□□ 0.69
LIME1-201ENST00000309546 KAZNQ674X7 775 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms