RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 GDAP1Q8TB36 358 aa19.71■□□□□ 0.75
VEGFB-201ENST00000309422 BAHD1Q8TBE0 780 aaPredicted RBP19.71■□□□□ 0.75
VEGFB-201ENST00000309422 GRK7Q8WTQ7 553 aa19.71■□□□□ 0.75
VEGFB-201ENST00000309422 NAPGQ99747 312 aaPredicted RBP19.71■□□□□ 0.75
VEGFB-201ENST00000309422 GSDMCQ9BYG8 508 aa19.71■□□□□ 0.75
VEGFB-201ENST00000309422 ZCCHC2Q9C0B9 1178 aaKnown RBP19.71■□□□□ 0.75
VEGFB-201ENST00000309422 RAB6BQ9NRW1 208 aa19.71■□□□□ 0.75
VEGFB-201ENST00000309422 UCKL1Q9NWZ5 548 aa19.71■□□□□ 0.75
VEGFB-201ENST00000309422 PYCARDQ9ULZ3 195 aa19.71■□□□□ 0.75
VEGFB-201ENST00000309422 DRG1Q9Y295 367 aaKnown RBP19.71■□□□□ 0.75
VEGFB-201ENST00000309422 SPO11Q9Y5K1 396 aa19.71■□□□□ 0.75
VEGFB-201ENST00000309422 TMEM202A6NGA9 273 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 LMO7DNF2Z398 122 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 LPOP22079 712 aaPredicted RBP19.7■□□□□ 0.74
VEGFB-201ENST00000309422 FOXC1Q12948 553 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 BIRC2Q13490 618 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 ITGA9Q13797 1035 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 TAF1AQ15573 450 aaPredicted RBP19.7■□□□□ 0.74
VEGFB-201ENST00000309422 CDKN3Q16667 212 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 DEFB133Q30KQ1 61 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 TAF8Q7Z7C8 310 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 SLC25A45Q8N413 288 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 PDCD7Q8N8D1 485 aaKnown RBP19.7■□□□□ 0.74
VEGFB-201ENST00000309422 OR1E3Q8WZA6 343 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 MAGOHBQ96A72 148 aaKnown RBP19.7■□□□□ 0.74
VEGFB-201ENST00000309422 BPIFA1Q9NP55 256 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 TTC7AQ9ULT0 858 aaPredicted RBP19.7■□□□□ 0.74
VEGFB-201ENST00000309422 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.7■□□□□ 0.745e-20■■■□□ 15.7
VEGFB-201ENST00000309422 GLYATL1P3A0A0U1RQE8 302 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 AP3B1O00203 1094 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 SIGLEC6O43699 453 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 USP12O75317 370 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 RFPL3O75679 317 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 SLC25A14O95258 325 aaPredicted RBP19.7■□□□□ 0.74
VEGFB-201ENST00000309422 METTL18O95568 372 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 ADRB1P08588 477 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 CKMT2P17540 419 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 HADHAP40939 763 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 BASP1P80723 227 aaKnown RBP19.7■□□□□ 0.74
VEGFB-201ENST00000309422 CDH17Q12864 832 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 ILKQ13418 452 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 C1orf61Q13536 156 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 SEPT6Q14141 434 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 NR0B2Q15466 257 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 N4BP2L1Q5TBK1 243 aaPredicted RBP19.7■□□□□ 0.74
VEGFB-201ENST00000309422 LVRNQ6Q4G3 990 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 RANBP10Q6VN20 620 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 RFLNAQ6ZTI6 216 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 RASGEF1CQ8N431 466 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 BRSK1Q8TDC3 778 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 TTC25Q96NG3 672 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 LGR4Q9BXB1 951 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 FRMD8Q9BZ67 464 aaPredicted RBP19.7■□□□□ 0.74
VEGFB-201ENST00000309422 RMI1Q9H9A7 625 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 VPS18Q9P253 973 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 KLF15Q9UIH9 416 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 APPL1Q9UKG1 709 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 GPSM3Q9Y4H4 160 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 PCDHGA1Q9Y5H4 931 aa19.7■□□□□ 0.74
VEGFB-201ENST00000309422 USP27XA6NNY8 438 aa19.69■□□□□ 0.74
VEGFB-201ENST00000309422 GPR89AB7ZAQ6 455 aa19.69■□□□□ 0.74
VEGFB-201ENST00000309422 IVLP07476 585 aa19.69■□□□□ 0.74
VEGFB-201ENST00000309422 APRTP07741 180 aa19.69■□□□□ 0.74
VEGFB-201ENST00000309422 GPR89BP0CG08 455 aa19.69■□□□□ 0.74
VEGFB-201ENST00000309422 BPIP17213 487 aa19.69■□□□□ 0.74
VEGFB-201ENST00000309422 ADRA1AP35348 466 aa19.69■□□□□ 0.74
VEGFB-201ENST00000309422 SPARCL1Q14515 664 aa19.69■□□□□ 0.74
VEGFB-201ENST00000309422 TCEA2Q15560 299 aa19.69■□□□□ 0.74
VEGFB-201ENST00000309422 C6orf132Q5T0Z8 1188 aa19.69■□□□□ 0.74
VEGFB-201ENST00000309422 MARK2Q7KZI7 788 aaKnown RBP19.69■□□□□ 0.74
VEGFB-201ENST00000309422 KANSL1Q7Z3B3 1105 aa19.69■□□□□ 0.74
VEGFB-201ENST00000309422 ACTRT1Q8TDG2 376 aa19.69■□□□□ 0.74
VEGFB-201ENST00000309422 OR2M4Q96R27 311 aa19.69■□□□□ 0.74
VEGFB-201ENST00000309422 TCEAL2Q9H3H9 227 aaPredicted RBP19.69■□□□□ 0.74
VEGFB-201ENST00000309422 MRPL40Q9NQ50 206 aaKnown RBP19.69■□□□□ 0.74
VEGFB-201ENST00000309422 TRNAU1APQ9NX07 287 aaKnown RBP19.69■□□□□ 0.74
VEGFB-201ENST00000309422 SUFUQ9UMX1 484 aa19.69■□□□□ 0.74
VEGFB-201ENST00000309422 SLC17A4Q9Y2C5 497 aa19.69■□□□□ 0.74
VEGFB-201ENST00000309422 PAFAH1B1P43034 410 aa19.68■□□□□ 0.74
VEGFB-201ENST00000309422 SARNPP82979 210 aaKnown RBP19.68■□□□□ 0.74
VEGFB-201ENST00000309422 LRP8Q14114 963 aa19.68■□□□□ 0.74
VEGFB-201ENST00000309422 SIX1Q15475 284 aaPredicted RBP19.68■□□□□ 0.74
VEGFB-201ENST00000309422 FAM151BQ6UXP7 276 aa19.68■□□□□ 0.74
VEGFB-201ENST00000309422 TRIM74Q86UV6 250 aa19.68■□□□□ 0.74
VEGFB-201ENST00000309422 PELI3Q8N2H9 469 aa19.68■□□□□ 0.74
VEGFB-201ENST00000309422 FAM181AQ8N9Y4 354 aa19.68■□□□□ 0.74
VEGFB-201ENST00000309422 GPR26Q8NDV2 337 aa19.68■□□□□ 0.74
VEGFB-201ENST00000309422 NAT6Q93015 286 aa19.68■□□□□ 0.74
VEGFB-201ENST00000309422 GLYATL1Q969I3 302 aa19.68■□□□□ 0.74
VEGFB-201ENST00000309422 TRIM44Q96DX7 344 aaPredicted RBP19.68■□□□□ 0.74
VEGFB-201ENST00000309422 MS4A14Q96JA4 679 aa19.68■□□□□ 0.74
VEGFB-201ENST00000309422 AGAP2Q99490 1192 aa19.68■□□□□ 0.74
VEGFB-201ENST00000309422 GORASP1Q9BQQ3 440 aa19.68■□□□□ 0.74
VEGFB-201ENST00000309422 AP1M1Q9BXS5 423 aa19.68■□□□□ 0.74
VEGFB-201ENST00000309422 ETNK1Q9HBU6 452 aa19.68■□□□□ 0.74
VEGFB-201ENST00000309422 ARL5AQ9Y689 179 aa19.68■□□□□ 0.74
VEGFB-201ENST00000309422 TMEM131Q92545 1883 aa19.67■□□□□ 0.74
VEGFB-201ENST00000309422 TRIM38O00635 465 aa19.67■□□□□ 0.74
VEGFB-201ENST00000309422 AURKAO14965 403 aa19.67■□□□□ 0.74
VEGFB-201ENST00000309422 SOD1P00441 154 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms