RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 BTBD6Q96KE9 485 aa12.12□□□□□ -0.47
TPT1-201ENST00000309246 AGAP2Q99490 1192 aa12.12□□□□□ -0.47
TPT1-201ENST00000309246 SEMA3CQ99985 751 aa12.12□□□□□ -0.47
TPT1-201ENST00000309246 SLC12A9Q9BXP2 914 aa12.12□□□□□ -0.47
TPT1-201ENST00000309246 KRTAP3-3Q9BYR6 98 aa12.12□□□□□ -0.47
TPT1-201ENST00000309246 KRTAP3-2Q9BYR7 98 aa12.12□□□□□ -0.47
TPT1-201ENST00000309246 OCIAD1Q9NX40 245 aa12.12□□□□□ -0.47
TPT1-201ENST00000309246 IL17BQ9UHF5 180 aa12.12□□□□□ -0.47
TPT1-201ENST00000309246 PPIL1Q9Y3C6 166 aa12.12□□□□□ -0.47
TPT1-201ENST00000309246 PCDHGA3Q9Y5H0 932 aa12.12□□□□□ -0.47
TPT1-201ENST00000309246 EFCAB7A8K855 629 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 INPP4BO15327 924 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 SUV39H1O43463 412 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 MFSD11O43934 449 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 FZD6O60353 706 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 PPFIA2O75334 1257 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 SFTPCP11686 197 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 LIFP15018 202 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 CSTF2P33240 577 aaKnown RBP eCLIP12.11□□□□□ -0.47
TPT1-201ENST00000309246 UGT1A3P35503 534 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 DSC2Q02487 901 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 MMRN1Q13201 1228 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 PEX6Q13608 980 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 ANO6Q4KMQ2 910 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 PYCR3Q53H96 274 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 CCDC183Q5T5S1 534 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 FAM129CQ86XR2 697 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 IL22RA1Q8N6P7 574 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 CCDC112Q8NEF3 446 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 SLC37A2Q8TED4 501 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 TEKT4Q8WW24 435 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 GBP4Q96PP9 640 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 ISCUQ9H1K1 167 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 SLC39A1Q9NY26 324 aa12.11□□□□□ -0.47
TPT1-201ENST00000309246 PCYT1BQ9Y5K3 369 aaPredicted RBP12.11□□□□□ -0.47
TPT1-201ENST00000309246 A0A0J9YYE9 177 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 A8MU76 341 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 MAP3K7O43318 606 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 MAP3K6O95382 1288 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 ASMTLO95671 621 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 EML2O95834 649 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 TRBC1P01850 177 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 EPHB1P54762 984 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 GPLD1P80108 840 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 LSM11P83369 360 aaKnown RBP eCLIP12.1□□□□□ -0.47
TPT1-201ENST00000309246 SLC25A11Q02978 314 aaKnown RBP12.1□□□□□ -0.47
TPT1-201ENST00000309246 PTSQ03393 145 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 SQSTM1Q13501 440 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 PIGHQ14442 188 aaPredicted RBP12.1□□□□□ -0.47
TPT1-201ENST00000309246 KRT81Q14533 505 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 IHHQ14623 411 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 FILIP1LQ4L180 1135 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 TDRD12Q587J7 1177 aaKnown RBP12.1□□□□□ -0.47
TPT1-201ENST00000309246 SNAP47Q5SQN1 464 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 ANKS6Q68DC2 871 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 TMEM71Q6P5X7 295 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 ZNF765Q7L2R6 523 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 GALNT13Q8IUC8 556 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 NRSN1Q8IZ57 195 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 CACNA2D3Q8IZS8 1091 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 NDUFAF2Q8N183 169 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 TEX26Q8N6G2 289 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 AHCYL2Q96HN2 611 aaKnown RBP12.1□□□□□ -0.47
TPT1-201ENST00000309246 SLC38A3Q99624 504 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 DPYSL5Q9BPU6 564 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 RIOK2Q9BVS4 552 aaKnown RBP12.1□□□□□ -0.47
TPT1-201ENST00000309246 DDA1Q9BW61 102 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 POLR1EQ9GZS1 481 aaKnown RBP12.1□□□□□ -0.47
TPT1-201ENST00000309246 SLC25A18Q9H1K4 315 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 GEMIN8Q9NWZ8 242 aaKnown RBP12.1□□□□□ -0.47
TPT1-201ENST00000309246 ANAPC7Q9UJX3 599 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 CHKBQ9Y259 395 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 PRKAB1Q9Y478 270 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 TTLL3Q9Y4R7 772 aa12.1□□□□□ -0.47
TPT1-201ENST00000309246 B4E171 279 aa12.09□□□□□ -0.47
TPT1-201ENST00000309246 DUX1O43812 170 aa12.09□□□□□ -0.47
TPT1-201ENST00000309246 RAD1O60671 282 aa12.09□□□□□ -0.47
TPT1-201ENST00000309246 ATP1A1P05023 1023 aaKnown RBP12.09□□□□□ -0.47
TPT1-201ENST00000309246 CD48P09326 243 aa12.09□□□□□ -0.47
TPT1-201ENST00000309246 ZNF30P17039 623 aa12.09□□□□□ -0.47
TPT1-201ENST00000309246 GJC1P36383 396 aa12.09□□□□□ -0.47
TPT1-201ENST00000309246 GARSP41250 739 aaKnown RBP12.09□□□□□ -0.47
TPT1-201ENST00000309246 TSPAN7P41732 249 aa12.09□□□□□ -0.47
TPT1-201ENST00000309246 SSR1P43307 286 aaKnown RBP12.09□□□□□ -0.47
TPT1-201ENST00000309246 FASLGP48023 281 aa12.09□□□□□ -0.47
TPT1-201ENST00000309246 STC1P52823 247 aa12.09□□□□□ -0.47
TPT1-201ENST00000309246 BORAQ6PGQ7 559 aa12.09□□□□□ -0.47
TPT1-201ENST00000309246 SFRP1Q8N474 314 aa12.09□□□□□ -0.47
TPT1-201ENST00000309246 NIPA2Q8N8Q9 360 aa12.09□□□□□ -0.47
TPT1-201ENST00000309246 LPCAT1Q8NF37 534 aa12.09□□□□□ -0.47
TPT1-201ENST00000309246 OR10G6Q8NH81 332 aa12.09□□□□□ -0.47
TPT1-201ENST00000309246 LRRN4Q8WUT4 740 aa12.09□□□□□ -0.47
TPT1-201ENST00000309246 COX14Q96I36 57 aa12.09□□□□□ -0.47
TPT1-201ENST00000309246 NAP1L5Q96NT1 182 aaPredicted RBP12.09□□□□□ -0.47
TPT1-201ENST00000309246 NUP85Q9BW27 656 aa12.09□□□□□ -0.47
TPT1-201ENST00000309246 NAT10Q9H0A0 1025 aaKnown RBP12.09□□□□□ -0.47
TPT1-201ENST00000309246 THAP2Q9H0W7 228 aa12.09□□□□□ -0.47
TPT1-201ENST00000309246 ZNHIT2Q9UHR6 403 aa12.09□□□□□ -0.47
TPT1-201ENST00000309246 OAS3Q9Y6K5 1087 aaKnown RBP12.09□□□□□ -0.47
TPT1-201ENST00000309246 SPTA1P02549 2419 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms