RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 ZNF563Q8TA94 476 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 PCED1BQ96HM7 432 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 ADAM33Q9BZ11 813 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 SHCBP1LQ9BZQ2 653 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 ARHGEF4Q9NR80 690 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 SIN3BO75182 1162 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 NDST3O95803 873 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 S100A9P06702 114 aaKnown RBP8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 CASRP41180 1078 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 RFTN2Q52LD8 501 aaPredicted RBP8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 RAD9BQ6WBX8 426 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 CXXC5Q7LFL8 322 aaKnown RBP8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 CENPSQ8N2Z9 138 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 CD101Q93033 1021 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 INTS10Q9NVR2 710 aaKnown RBP8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 PCDHGB5Q9Y5G0 923 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 SCN2BO60939 215 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 NOMO3P69849 1222 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 GNA12Q03113 381 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 NR1D2Q14995 579 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 SEMA3CQ99985 751 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 DOCK5Q9H7D0 1870 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 RASGRP1O95267 797 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 ATP6V1B1P15313 513 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 SLC7A2P52569 658 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 SLC10A6Q3KNW5 377 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 TBCELQ5QJ74 424 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 ARMC8Q8IUR7 673 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 SAMD14Q8IZD0 417 aaPredicted RBP8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 WDR24Q96S15 920 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 ARHGAP20Q9P2F6 1191 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 CNOT1A5YKK6 2376 aaKnown RBP8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 ISM1B1AKI9 464 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 SLC25A14O95258 325 aaPredicted RBP8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 LAPTM5Q13571 262 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 MTF1Q14872 753 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 FBXO43Q4G163 708 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 ADHFE1Q8IWW8 467 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 C1orf127Q8N9H9 656 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 C12orf50Q8NA57 414 aaPredicted RBP8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 FBXO36Q8NEA4 188 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 CLP1Q92989 425 aaKnown RBP8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 RAB7BQ96AH8 199 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 MYO19Q96H55 970 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 UBP1Q9NZI7 540 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 GMIPQ9P107 970 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 PSME4Q14997 1843 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 TPD52L2O43399 206 aaKnown RBP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 KCNH1O95259 989 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 SNAI1O95863 264 aaPredicted RBP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 CD86P42081 329 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 ERFP50548 548 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 CASP5P51878 434 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 RPL26P61254 145 aaKnown RBP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 STXBP5Q5T5C0 1151 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 CHST9Q7L1S5 443 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 ARHGEF19Q8IW93 802 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 NRSN1Q8IZ57 195 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 GRIN3AQ8TCU5 1115 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 VRTNQ9H8Y1 702 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 LIMD1Q9UGP4 676 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 RPL26L1Q9UNX3 145 aaKnown RBP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 INVSQ9Y283 1065 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 BACE2Q9Y5Z0 518 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 RTTNQ86VV8 2226 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 BRWD1Q9NSI6 2320 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 FAM186AA6NE01 2351 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 A0A0X1KG70 313 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 KIF1CO43896 1103 aaKnown RBP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 LDLRP01130 860 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 EPHX1P07099 455 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 OGNP20774 298 aaKnown RBP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 AMPD1P23109 780 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 ARFIP1P53367 373 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 IRF8Q02556 426 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 FAXCQ5TGI0 409 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 EEF1DP3Q658K8 133 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 ULK3Q6PHR2 472 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 KCNK18Q7Z418 384 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 DNAJB7Q7Z6W7 309 aaPredicted RBP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 GALNT13Q8IUC8 556 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 TTLQ8NG68 377 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 OR5T3Q8NGG3 340 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 ZNF473Q8WTR7 871 aaKnown RBP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 TESCQ96BS2 214 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 TEKT5Q96M29 485 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 CCT8L2Q96SF2 557 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 KLF6Q99612 283 aaPredicted RBP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 MID1IP1Q9NPA3 183 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 GDE1Q9NZC3 331 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 SCML1Q9UN30 329 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 SHANK3Q9BYB0 1731 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 MAGEA13PA6NCF6 341 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 BTN3A1O00481 513 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 SERPINB7O75635 380 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 ADH5P11766 374 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 MYL9P24844 172 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 CDC42P60953 191 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 MYBPC3Q14896 1274 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 ZNF470Q6ECI4 717 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms