RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 FBXW11Q9UKB1 542 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 ZFP37Q9Y6Q3 630 aaPredicted RBP15.9■□□□□ 0.14
USP42-201ENST00000306177 ATG13O75143 517 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 WFS1O76024 890 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 JAG1P78504 1218 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 ANKS1BQ7Z6G8 1248 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 SFRP1Q8N474 314 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 TBATAQ96M53 351 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 AARSD1Q9BTE6 412 aaKnown RBP15.89■□□□□ 0.13
USP42-201ENST00000306177 MRPS26Q9BYN8 205 aaKnown RBP15.89■□□□□ 0.13
USP42-201ENST00000306177 NMUR2Q9GZQ4 415 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 SPRTNQ9H040 489 aaPredicted RBP15.89■□□□□ 0.13
USP42-201ENST00000306177 MFSD1Q9H3U5 465 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 SAMHD1Q9Y3Z3 626 aaKnown RBP15.89■□□□□ 0.13
USP42-201ENST00000306177 KELP23276 732 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 ZNF57Q68EA5 555 aaPredicted RBP15.89■□□□□ 0.13
USP42-201ENST00000306177 B3GNT6Q6ZMB0 384 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 AGMOQ6ZNB7 445 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 AMIGO2Q86SJ2 522 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 COMMD2Q86X83 199 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 SPATA22Q8NHS9 363 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 MYDGFQ969H8 173 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 GPR21Q99679 349 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 EGFL7Q9UHF1 273 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 ATXN2Q99700 1313 aaKnown RBP15.89■□□□□ 0.13
USP42-201ENST00000306177 NUP62P37198 522 aaPredicted RBP15.89■□□□□ 0.13
USP42-201ENST00000306177 GNPDA1P46926 289 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 MPP1Q00013 466 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 ELP6Q0PNE2 266 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 RFX4Q33E94 735 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 PPM1JQ5JR12 505 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 CHSY3Q70JA7 882 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 HMCESQ96FZ2 354 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 SLC38A2Q96QD8 506 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 REXO4Q9GZR2 422 aaKnown RBP15.89■□□□□ 0.13
USP42-201ENST00000306177 SGK2Q9HBY8 427 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 HMG20AQ9NP66 347 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 DNAJC11Q9NVH1 559 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 ZNF490Q9ULM2 529 aaPredicted RBP15.89■□□□□ 0.13
USP42-201ENST00000306177 CORO1CQ9ULV4 474 aaPredicted RBP15.89■□□□□ 0.13
USP42-201ENST00000306177 OR10H1Q9Y4A9 318 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 CCDC189A1A4V9 331 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 GSAPA4D1B5 854 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 CCL16O15467 120 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 OR6B1O95007 311 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 ALOX12P18054 663 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 ARHGAP1Q07960 439 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 GK5Q6ZS86 529 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 C17orf64Q86WR6 236 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 OR4A15Q8NGL6 344 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 ZNF607Q96SK3 696 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 OLFM1Q99784 485 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 EIF2B3Q9NR50 452 aaKnown RBP15.89■□□□□ 0.13
USP42-201ENST00000306177 GTF2IRD1Q9UHL9 959 aa15.89■□□□□ 0.13
USP42-201ENST00000306177 PIGRP01833 764 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 HIST1H2ABP04908 130 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 NR1H2P55055 460 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 XIAPP98170 497 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 PRKCZQ05513 592 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 ACAP2Q15057 778 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 HIST3H2AQ7L7L0 130 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 CPA6Q8N4T0 437 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 GSTCDQ8NEC7 633 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 HIST1H2ACQ93077 130 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 NUAK2Q9H093 628 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 PNPLA3Q9NST1 481 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 SATB2Q9UPW6 733 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 SUV39H1O43463 412 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 CCNDBP1O95273 360 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 FECHP22830 423 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 ITPKAP23677 461 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 SLC6A2P23975 617 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 HNRNPDQ14103 355 aaKnown RBP15.88■□□□□ 0.13
USP42-201ENST00000306177 MAPK11Q15759 364 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.88■□□□□ 0.13
USP42-201ENST00000306177 CHST9Q7L1S5 443 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 CPSF7Q8N684 471 aaKnown RBP15.88■□□□□ 0.13
USP42-201ENST00000306177 OR2T12Q8NG77 320 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 PCDH19Q8TAB3 1148 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 C2orf15Q8WU43 125 aaKnown RBP15.88■□□□□ 0.13
USP42-201ENST00000306177 PLD4Q96BZ4 506 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 ABCG8Q9H221 673 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 NUDT4Q9NZJ9 180 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 INSIG1O15503 277 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 UGT2B15P54855 530 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 SPIBQ01892 262 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 IL10RBQ08334 325 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 PEX6Q13608 980 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 METTL21CQ5VZV1 264 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 CYP4X1Q8N118 509 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 SLC47A1Q96FL8 570 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 EVA1BQ9NVM1 165 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 NFATC1O95644 943 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 TSTD2Q5T7W7 516 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 CPTPQ5TA50 214 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 LINGO4Q6UY18 593 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 ZNF540Q8NDQ6 660 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 ENKURQ8TC29 256 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 TLE6Q9H808 572 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 PHPT1Q9NRX4 125 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms