RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 H7C2Y5 167 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 HOXA2O43364 376 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 ANXA8L1Q5VT79 327 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 TNS4Q8IZW8 715 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 MTMR4Q9NYA4 1195 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 POMCP01189 267 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 CD2P06729 351 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 NRG1Q02297 640 aaPredicted RBP13.36□□□□□ -0.27
TRIM56-201ENST00000306085 TLE2Q04725 743 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 ARSKQ6UWY0 536 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 SPATA6LQ8N4H0 392 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 C12orf50Q8NA57 414 aaPredicted RBP13.36□□□□□ -0.27
TRIM56-201ENST00000306085 FERD3LQ96RJ6 166 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 TBC1D10AQ9BXI6 508 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 IL22Q9GZX6 179 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 CLPXO76031 633 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 SLC16A8O95907 504 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 NDUFB10O96000 172 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 IFNA2P01563 188 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 AIMP2Q13155 320 aaKnown RBP13.36□□□□□ -0.27
TRIM56-201ENST00000306085 PIWIL2Q8TC59 973 aaKnown RBP13.36□□□□□ -0.27
TRIM56-201ENST00000306085 NPAS2Q99743 824 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 ZYG11BQ9C0D3 744 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 AP1M2Q9Y6Q5 423 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 YBX3P16989 372 aaKnown RBP eCLIP13.36□□□□□ -0.27
TRIM56-201ENST00000306085 TKFCQ3LXA3 575 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 C3orf67Q6ZVT6 689 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 RTKNQ9BST9 563 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 FPGTO14772 594 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 OR2B6P58173 313 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 ZNF155Q12901 538 aaPredicted RBP13.36□□□□□ -0.27
TRIM56-201ENST00000306085 TTI2Q6NXR4 508 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 CFAP206Q8IYR0 622 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 MPP5Q8N3R9 675 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 PTGR2Q8N8N7 351 aaPredicted RBP13.36□□□□□ -0.27
TRIM56-201ENST00000306085 THAP6Q8TBB0 222 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 IRF2BPLQ9H1B7 796 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 PLEKHA6Q9Y2H5 1048 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 TIMM13Q9Y5L4 95 aaPredicted RBP13.36□□□□□ -0.27
TRIM56-201ENST00000306085 ERVK-24P63145 666 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 ITFG2Q969R8 447 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 MYH7BA7E2Y1 1941 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 GRIN2AQ12879 1464 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 GAKO14976 1311 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 M0R129 80 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 SPARCP09486 303 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 SLC9A3P48764 834 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 FAM153CQ494X1 144 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 SLC45A4Q5BKX6 768 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 ZNF709Q8N972 641 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 SUSD6Q92537 303 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 SLC5A5Q92911 643 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 AP2M1Q96CW1 435 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 ASB8Q9H765 288 aa13.36□□□□□ -0.27
TRIM56-201ENST00000306085 RABL2AQ9UBK7 228 aaPredicted RBP13.36□□□□□ -0.27
TRIM56-201ENST00000306085 C13orf42A0A1B0GVH6 325 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 GCATO75600 419 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 MYL6P60660 151 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 RCN3Q96D15 328 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 MRPL57Q9BQC6 102 aaKnown RBP13.35□□□□□ -0.27
TRIM56-201ENST00000306085 NUDT15Q9NV35 164 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 PAX3P23760 479 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 CLCN3P51790 818 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 CCNHP51946 323 aaPredicted RBP13.35□□□□□ -0.27
TRIM56-201ENST00000306085 FSTL1Q12841 308 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 TCF25Q9BQ70 676 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 RNF38Q9H0F5 515 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 KCTD5Q9NXV2 234 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 ABCC10Q5T3U5 1492 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 ZNF20P17024 532 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 PSMB4P28070 264 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 PTPN11Q06124 597 aaPredicted RBP13.35□□□□□ -0.27
TRIM56-201ENST00000306085 SLC16A9Q7RTY1 509 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 DNAAF5Q86Y56 855 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 HM13Q8TCT9 377 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 ZNF398Q8TD17 642 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 GIN1Q9NXP7 522 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 AIREO43918 545 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 TTPAP49638 278 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 KIAA1324Q6UXG2 1013 aaKnown RBP13.35□□□□□ -0.27
TRIM56-201ENST00000306085 ANKEF1Q9NU02 776 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 ABCD2Q9UBJ2 740 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 PROSCO94903 275 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 TRBC1P01850 177 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 EPHA3P29320 983 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 FAM171A1Q5VUB5 890 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 TAPT1Q6NXT6 567 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 ZNF570Q96NI8 536 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 RC3H2Q9HBD1 1191 aaKnown RBP13.35□□□□□ -0.27
TRIM56-201ENST00000306085 SLC39A1Q9NY26 324 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 CYTH4Q9UIA0 394 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 PRDM4Q9UKN5 801 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 NAGLUP54802 743 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 STXBP5Q5T5C0 1151 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 ZSWIM3Q96MP5 696 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 USP30Q70CQ3 517 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 TMIEQ8NEW7 156 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 KLHL15Q96M94 604 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 ABCG4Q9H172 646 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 SPON1Q9HCB6 807 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms