RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 RASGEF1CQ8N431 466 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 INPP5DQ92835 1189 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 CAVIN3Q969G5 261 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 RAB7BQ96AH8 199 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 CMTM5Q96DZ9 223 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 C12orf66Q96MD2 445 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 ECSITQ9BQ95 431 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 DPY30Q9C005 99 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 CRISPLD2Q9H0B8 497 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 RHOJQ9H4E5 214 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 MARCH5Q9NX47 278 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 KIF17Q9P2E2 1029 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 DNMT3BQ9UBC3 853 aaKnown RBP9.23□□□□□ -0.93
PTPRE-202ENST00000306042 MRPS33Q9Y291 106 aaKnown RBP9.23□□□□□ -0.93
PTPRE-202ENST00000306042 USP15Q9Y4E8 981 aaPredicted RBP9.23□□□□□ -0.93
PTPRE-202ENST00000306042 SNX8Q9Y5X2 465 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 MYO7AQ13402 2215 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 LCHNA4D1U4 455 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 AIM2O14862 343 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 RGS14O43566 566 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 LEFTY1O75610 366 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 SERPINE1P05121 402 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 ITGA2BP08514 1039 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 CHRNA4P43681 627 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 OGDHQ02218 1023 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 CREB5Q02930 508 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 OVGP1Q12889 678 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 NAA25Q14CX7 972 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 C1orf146Q5VVC0 180 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 BROXQ5VW32 411 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 IL27RAQ6UWB1 636 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 LAYNQ6UX15 382 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 APTXQ7Z2E3 356 aaKnown RBP9.23□□□□□ -0.93
PTPRE-202ENST00000306042 FNDC5Q8NAU1 212 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 SHKBP1Q8TBC3 707 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 MTFMTQ96DP5 389 aaKnown RBP9.23□□□□□ -0.93
PTPRE-202ENST00000306042 TRMT2BQ96GJ1 504 aaKnown RBP9.23□□□□□ -0.93
PTPRE-202ENST00000306042 PIWIL1Q96J94 861 aaKnown RBP9.23□□□□□ -0.93
PTPRE-202ENST00000306042 PRICKLE1Q96MT3 831 aaPredicted RBP9.23□□□□□ -0.93
PTPRE-202ENST00000306042 TCF12Q99081 682 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 SLC46A2Q9BY10 475 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 SRMSQ9H3Y6 488 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 GDF3Q9NR23 364 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 SPATS2LQ9NUQ6 558 aaKnown RBP9.23□□□□□ -0.93
PTPRE-202ENST00000306042 ABI3Q9P2A4 366 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 GOLGA4Q13439 2230 aaKnown RBP9.22□□□□□ -0.93
PTPRE-202ENST00000306042 GOT2P00505 430 aaKnown RBP9.22□□□□□ -0.93
PTPRE-202ENST00000306042 SERPINB4P48594 390 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 AP5B1Q2VPB7 878 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 GPR33Q49SQ1 333 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 PAGE2Q7Z2X7 111 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 GKN2Q86XP6 184 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 C2orf73Q8N5S3 287 aaPredicted RBP9.22□□□□□ -0.93
PTPRE-202ENST00000306042 LINC01465Q8N7H1 131 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 ITFG1Q8TB96 612 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 MDM1Q8TC05 714 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 LMX1AQ8TE12 382 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 SORCS1Q8WY21 1168 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 ART4Q93070 314 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 TUBGCP5Q96RT8 1024 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 YY1AP1Q9H869 796 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 FBRSQ9HAH7 460 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 ARAP2Q8WZ64 1704 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 TTC24A2A3L6 582 aaPredicted RBP9.22□□□□□ -0.93
PTPRE-202ENST00000306042 NDUFB5O43674 189 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 PTGER3P43115 390 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 NME5P56597 212 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 RPS21P63220 83 aaKnown RBP9.22□□□□□ -0.93
PTPRE-202ENST00000306042 PITX1P78337 314 aaPredicted RBP9.22□□□□□ -0.93
PTPRE-202ENST00000306042 SKOR1P84550 965 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 STX5Q13190 355 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 MSLNQ13421 630 aaPredicted RBP9.22□□□□□ -0.93
PTPRE-202ENST00000306042 ZNF805Q5CZA5 627 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 COLEC12Q5KU26 742 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 TXNRD3NBQ6F5E7 133 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 SLC30A9Q6PML9 568 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 ALKAL1Q6UXT8 129 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 KYAT3Q6YP21 454 aaKnown RBP9.22□□□□□ -0.93
PTPRE-202ENST00000306042 LYSMD3Q7Z3D4 306 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 SNX20Q7Z614 316 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 LDB1Q86U70 411 aaPredicted RBP9.22□□□□□ -0.93
PTPRE-202ENST00000306042 TRIML2Q8N7C3 387 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 TCP10LQ8TDR4 215 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 IGSF8Q969P0 613 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 CLIP3Q96DZ5 547 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 ZNF641Q96N77 438 aaPredicted RBP9.22□□□□□ -0.93
PTPRE-202ENST00000306042 FAIM2Q9BWQ8 316 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 SALL4Q9UJQ4 1053 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 TCHHQ07283 1943 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 LOC100653049A0A140TA62 436 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 KRT34O76011 436 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 MLYCDO95822 493 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 ARSAP15289 507 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 BGNP21810 368 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 CMPK1P30085 196 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 MBTPS1Q14703 1052 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 NDUFA9Q16795 377 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 DUPD1Q68J44 220 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 DPY19L3Q6ZPD9 716 aa9.22□□□□□ -0.93
PTPRE-202ENST00000306042 CYP2U1Q7Z449 544 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms