RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 PTCD2Q8WV60 388 aaKnown RBP13.9□□□□□ -0.18
PRKCB-201ENST00000303531 DGCR14Q96DF8 476 aaKnown RBP13.9□□□□□ -0.18
PRKCB-201ENST00000303531 BTBD9Q96Q07 612 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 TDRD1Q9BXT4 1180 aaKnown RBP13.9□□□□□ -0.18
PRKCB-201ENST00000303531 SGK2Q9HBY8 427 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 C5orf60A6NFR6 353 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 TRBC1P01850 177 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 TRAP1Q12931 704 aaKnown RBP13.9□□□□□ -0.18
PRKCB-201ENST00000303531 RIPK1Q13546 671 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 RERGQ96A58 199 aaPredicted RBP13.9□□□□□ -0.18
PRKCB-201ENST00000303531 SKA1Q96BD8 255 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 MFSD3Q96ES6 412 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 TMEM109Q9BVC6 243 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 ST6GALNAC4Q9H4F1 302 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.89□□□□□ -0.19
PRKCB-201ENST00000303531 LIMK2P53671 638 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 QPRTQ15274 297 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 VPS26BQ4G0F5 336 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 CLEC6AQ6EIG7 209 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 KIAA1324Q6UXG2 1013 aaKnown RBP13.89□□□□□ -0.19
PRKCB-201ENST00000303531 PYROXD2Q8N2H3 581 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 PIH1D2Q8WWB5 315 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 NIFKQ9BYG3 293 aaKnown RBP13.89□□□□□ -0.19
PRKCB-201ENST00000303531 MAT2BQ9NZL9 334 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 KIAA1522Q9P206 1035 aaPredicted RBP13.89□□□□□ -0.19
PRKCB-201ENST00000303531 SSR3Q9UNL2 185 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 ZW10O43264 779 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 AQP1P29972 269 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 GNPDA1P46926 289 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 PSMD4P55036 377 aaKnown RBP13.89□□□□□ -0.19
PRKCB-201ENST00000303531 RGS1Q08116 209 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 ZNF846Q147U1 533 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 RAVER1Q8IY67 606 aaKnown RBP13.89□□□□□ -0.19
PRKCB-201ENST00000303531 APOLD1Q96LR9 279 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 CHID1Q9BWS9 393 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 LIN7AO14910 233 aaPredicted RBP13.89□□□□□ -0.19
PRKCB-201ENST00000303531 CTNNB1P35222 781 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 CCT3P49368 545 aaKnown RBP13.89□□□□□ -0.19
PRKCB-201ENST00000303531 C6orf52Q5T4I8 152 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 GALNT5Q7Z7M9 940 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 ZNF567Q8N184 647 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 TTPALQ9BTX7 342 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 RHOBTB2Q9BYZ6 727 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 LRTM1Q9HBL6 345 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 SLIT3O75094 1523 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 GLYATL1P3A0A0U1RQE8 302 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 URADA6NGE7 173 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 PRKAR2AP13861 404 aaKnown RBP13.89□□□□□ -0.19
PRKCB-201ENST00000303531 IL12AP29459 219 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 SLC5A3P53794 718 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 MANFP55145 182 aaKnown RBP13.89□□□□□ -0.19
PRKCB-201ENST00000303531 ATG14Q6ZNE5 492 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 ARHGEF4Q9NR80 690 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 TRMT13Q9NUP7 481 aaKnown RBP13.89□□□□□ -0.19
PRKCB-201ENST00000303531 NOCTQ9UK39 431 aaKnown RBP13.89□□□□□ -0.19
PRKCB-201ENST00000303531 NADKO95544 446 aaPredicted RBP13.89□□□□□ -0.19
PRKCB-201ENST00000303531 GABRR2P28476 465 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 CRY2Q49AN0 593 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 MAB21L3Q8N8X9 362 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 GNEQ9Y223 722 aaKnown RBP13.89□□□□□ -0.19
PRKCB-201ENST00000303531 GCATO75600 419 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 FADS2O95864 444 aaKnown RBP13.89□□□□□ -0.19
PRKCB-201ENST00000303531 TOMM20Q15388 145 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 PNPT1Q8TCS8 783 aaKnown RBP13.89□□□□□ -0.19
PRKCB-201ENST00000303531 GPR21Q99679 349 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 PLK2Q9NYY3 685 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 RAI2Q9Y5P3 530 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 TP73O15350 636 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 TSPAN1O60635 241 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 CHRNB2P17787 502 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 DSC2Q02487 901 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 SWT1Q5T5J6 900 aaKnown RBP13.89□□□□□ -0.19
PRKCB-201ENST00000303531 PTF1AQ7RTS3 328 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 PGAM4Q8N0Y7 254 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 RNASE11Q8TAA1 199 aaKnown RBP13.89□□□□□ -0.19
PRKCB-201ENST00000303531 SPPL2BQ8TCT7 592 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 DPEP3Q9H4B8 488 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 PCDHB1Q9Y5F3 818 aa13.89□□□□□ -0.19
PRKCB-201ENST00000303531 BCL9LQ86UU0 1499 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 AGPSO00116 658 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 UTS2BQ765I0 119 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 SPATA22Q8NHS9 363 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 LPGAT1Q92604 370 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 TLCD1Q96CP7 247 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 IGLV3-22A0A075B6J6 115 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 CCDC189A1A4V9 331 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 NEDD8-MDP1E9PL57 170 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 HAT1O14929 419 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 ACSL4O60488 711 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 MYL9P24844 172 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 CCNCP24863 283 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 IRAK1BP1Q5VVH5 260 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 NAT16Q8N8M0 369 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 TFAP2BQ92481 460 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 ZNF780BQ9Y6R6 833 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 SSNA1O43805 119 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 C1RP00736 705 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 TAS2R41P59536 307 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 PEX6Q13608 980 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 ATAD1Q8NBU5 361 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms