RNA–Protein interactions for RNA: ENST00000303391.10

MECP2-201, Transcript of methyl-CpG binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MECP2, Length 10,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-201ENST00000303391 MKS1Q9NXB0 559 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 ERVK-11Q9UQG0 969 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 FAM50BQ9Y247 325 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 KDM4BO94953 1096 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 NR2F1P10589 423 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 CD72P21854 359 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 LPCAT4Q643R3 524 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 CUZD1Q86UP6 607 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 ASCC1Q8N9N2 400 aaKnown RBP10.88□□□□□ -0.67
MECP2-201ENST00000303391 SLC4A9Q96Q91 983 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 KLQ9UEF7 1012 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 RGL2O15211 777 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 CSF1RP07333 972 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 DEFA5Q01523 94 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 ZDHHC20Q5W0Z9 365 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 HAGHLQ6PII5 290 aaPredicted RBP10.88□□□□□ -0.67
MECP2-201ENST00000303391 ZC3H7AQ8IWR0 971 aaKnown RBP10.88□□□□□ -0.67
MECP2-201ENST00000303391 BCS1LQ9Y276 419 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 RPL36Q9Y3U8 105 aaKnown RBP10.88□□□□□ -0.67
MECP2-201ENST00000303391 ROBO2Q9HCK4 1378 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 CAPN15O75808 1086 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 UBR7Q8N806 425 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 AP1S3Q96PC3 154 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 INTS7Q9NVH2 962 aaKnown RBP10.88□□□□□ -0.67
MECP2-201ENST00000303391 ZNF70Q9UC06 446 aaPredicted RBP10.88□□□□□ -0.67
MECP2-201ENST00000303391 hCG_1818297A0A087WSY0 165 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 A0A1B0GVC2 190 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 CYP4B1P13584 511 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 GPR1P46091 355 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 DPY19L1Q2PZI1 675 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 KHDC1Q4VXA5 237 aaKnown RBP10.88□□□□□ -0.67
MECP2-201ENST00000303391 ZNF613Q6PF04 617 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 UNC93AQ86WB7 457 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 NUSAP1Q9BXS6 441 aaKnown RBP10.88□□□□□ -0.67
MECP2-201ENST00000303391 MTRRQ9UBK8 725 aa10.88□□□□□ -0.67
MECP2-201ENST00000303391 MAGEA12P43365 314 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 CLK3P49761 638 aaKnown RBP10.87□□□□□ -0.67
MECP2-201ENST00000303391 HMBOX1Q6NT76 420 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 ZNF248Q8NDW4 579 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 OR52K2Q8NGK3 314 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 DNAJB3Q8WWF6 145 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 MAFIPQ8WZ33 124 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 GFM1Q96RP9 751 aaKnown RBP10.87□□□□□ -0.67
MECP2-201ENST00000303391 PDP1Q9P0J1 537 aaPredicted RBP10.87□□□□□ -0.67
MECP2-201ENST00000303391 MAU2Q9Y6X3 613 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 TTC3P53804 2025 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 URADA6NGE7 173 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 MID1O15344 667 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 CDH5P33151 784 aaPredicted RBP10.87□□□□□ -0.67
MECP2-201ENST00000303391 GRIA2P42262 883 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 PLK1P53350 603 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 TBX4P57082 545 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 RAB5BP61020 215 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 KIF18BQ86Y91 864 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 SLC4A11Q8NBS3 891 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 C11orf65Q8NCR3 313 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 C12orf43Q96C57 262 aaKnown RBP10.87□□□□□ -0.67
MECP2-201ENST00000303391 MMP27Q9H306 513 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 CYP3A7-CYP3A51PA0A087WV96 503 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 H3BNH8 94 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 CYP3A7P24462 503 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 WSCD2Q2TBF2 565 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 FAAH2Q6GMR7 532 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 ZNF615Q8N8J6 731 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 SETD4Q9NVD3 440 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 THUMPD1Q9NXG2 353 aaKnown RBP10.87□□□□□ -0.67
MECP2-201ENST00000303391 GPR75-ASB3A0A0A6YYF3 556 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 IPO13O94829 963 aaKnown RBP10.87□□□□□ -0.67
MECP2-201ENST00000303391 PABPC4LP0CB38 370 aaKnown RBP10.87□□□□□ -0.67
MECP2-201ENST00000303391 LCN1P31025 176 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 FSTL1Q12841 308 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 HLFQ16534 295 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 GCNT6Q5T4J0 391 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 ZNF767PQ75MW2 155 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 BRSK2Q8IWQ3 736 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 TIGD4Q8IY51 512 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 FRMD6Q96NE9 622 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 ABI2Q9NYB9 513 aaPredicted RBP10.87□□□□□ -0.67
MECP2-201ENST00000303391 MAGED1Q9Y5V3 778 aaPredicted RBP10.87□□□□□ -0.67
MECP2-201ENST00000303391 SHROOM3Q8TF72 1996 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 SH3PXD2BA1X283 911 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 DSG4Q86SJ6 1040 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 ZNF410Q86VK4 478 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 SLC41A1Q8IVJ1 513 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 ADAM32Q8TC27 787 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 KCNQ5Q9NR82 932 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 KCNH4Q9UQ05 1017 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 OAS3Q9Y6K5 1087 aaKnown RBP10.87□□□□□ -0.67
MECP2-201ENST00000303391 PSEN1P49768 467 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 SCARF1Q14162 830 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 MPP2Q14168 576 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 PON3Q15166 354 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 PDSS2Q86YH6 399 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 SEMA4BQ9NPR2 832 aaPredicted RBP10.87□□□□□ -0.67
MECP2-201ENST00000303391 ERCC6L2Q5T890 1561 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 DHX15O43143 795 aaKnown RBP10.87□□□□□ -0.67
MECP2-201ENST00000303391 TFEBP19484 476 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 PSMB4P28070 264 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 CRAMP1Q96RY5 1269 aa10.87□□□□□ -0.67
MECP2-201ENST00000303391 LRRC4CQ9HCJ2 640 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms