RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 ZNF696Q9H7X3 374 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 EMCNQ9ULC0 261 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 ANGPTL1O95841 491 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 PRIM2P49643 509 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 ZNF132P52740 706 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 AP5B1Q2VPB7 878 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 TJAP1Q5JTD0 557 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 AHSA2Q719I0 299 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 PIM3Q86V86 326 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 LILRA2Q8N149 483 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 FIBCD1Q8N539 461 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 METTL25Q8N6Q8 603 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 PROX1Q92786 737 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 GBA3Q9H227 469 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 SPASTQ9UBP0 616 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 A8MT66 165 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 RAMP2O60895 175 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 PGLSO95336 258 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 MSH3P20585 1137 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 AZGP1P25311 298 aaKnown RBP12.11□□□□□ -0.47
PDGFD-201ENST00000302251 PMS2P3Q13401 168 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 CPSF6Q16630 551 aaKnown RBP eCLIP12.11□□□□□ -0.47
PDGFD-201ENST00000302251 MEP1AQ16819 746 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 ARMCX4Q5H9R4 360 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 SNX29P2Q8IUI4 249 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 GPR20Q99678 358 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 DUSP16Q9BY84 665 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 ELOVL6Q9H5J4 265 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 GMPR2Q9P2T1 348 aaKnown RBP12.11□□□□□ -0.47
PDGFD-201ENST00000302251 ZNF214Q9UL59 606 aaPredicted RBP12.11□□□□□ -0.47
PDGFD-201ENST00000302251 SPATA31A6Q5VVP1 1343 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 SLC25A27O95847 323 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 FMO3P31513 532 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 OR1G1P47890 313 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 POLR2JP52435 117 aaKnown RBP12.1□□□□□ -0.47
PDGFD-201ENST00000302251 B3GNT9Q6UX72 402 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 ANKRD46Q86W74 232 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 SETD9Q8NE22 299 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 ACVR1CQ8NER5 493 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 CDK15Q96Q40 435 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 RHOBTB2Q9BYZ6 727 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 SMURF2Q9HAU4 748 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 SACM1LQ9NTJ5 587 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 CATSPERZQ9NTU4 200 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 CRLS1Q9UJA2 301 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 FZD10Q9ULW2 581 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 POLR3HQ9Y535 204 aaPredicted RBP12.1□□□□□ -0.47
PDGFD-201ENST00000302251 C10orf71Q711Q0 1435 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 C7orf72A4D263 438 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 SDHDO14521 159 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 FAM189A1O60320 539 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 RGS20O76081 388 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 COL6A2P12110 1019 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 NKX2-5P52952 324 aaPredicted RBP12.1□□□□□ -0.47
PDGFD-201ENST00000302251 TRIM32Q13049 653 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 ERMP1Q7Z2K6 904 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 OLIG1Q8TAK6 271 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 MCOLN3Q8TDD5 553 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 MZB1Q8WU39 189 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 RAB2BQ8WUD1 216 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 LRRC58Q96CX6 371 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 TEKT5Q96M29 485 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 TRIM62Q9BVG3 475 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 WDR12Q9GZL7 423 aaKnown RBP12.1□□□□□ -0.47
PDGFD-201ENST00000302251 SATB2Q9UPW6 733 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 GMEB1Q9Y692 573 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 PNMA8CA0A1B0GUJ8 204 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 LZTS3O60299 673 aaPredicted RBP12.1□□□□□ -0.47
PDGFD-201ENST00000302251 TNFRSF21O75509 655 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 S100A3P33764 101 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 SOAT1P35610 550 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 MAGEA8P43361 318 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 GSK3BP49841 420 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 MBTD1Q05BQ5 628 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 C9orf57Q5W0N0 161 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 TMEM53Q6P2H8 277 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 SPNS2Q8IVW8 549 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 SVOPQ8N4V2 548 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 AMER2Q8N7J2 671 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 PNPT1Q8TCS8 783 aaKnown RBP12.1□□□□□ -0.47
PDGFD-201ENST00000302251 GPR152Q8TDT2 470 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 REXO5Q96IC2 774 aaKnown RBP12.1□□□□□ -0.47
PDGFD-201ENST00000302251 ZDHHC7Q9NXF8 308 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 SH3BP4Q9P0V3 963 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 SUCOQ9UBS9 1254 aaKnown RBP12.1□□□□□ -0.47
PDGFD-201ENST00000302251 PSME2Q9UL46 239 aa12.1□□□□□ -0.47
PDGFD-201ENST00000302251 XYLBO75191 536 aa12.09□□□□□ -0.47
PDGFD-201ENST00000302251 NDUFS2O75306 463 aa12.09□□□□□ -0.47
PDGFD-201ENST00000302251 CHRM5P08912 532 aaPredicted RBP12.09□□□□□ -0.47
PDGFD-201ENST00000302251 GRK3P35626 688 aa12.09□□□□□ -0.47
PDGFD-201ENST00000302251 DGKQP52824 942 aa12.09□□□□□ -0.47
PDGFD-201ENST00000302251 OAZ1P54368 228 aa12.09□□□□□ -0.47
PDGFD-201ENST00000302251 DIO3P55073 304 aa12.09□□□□□ -0.47
PDGFD-201ENST00000302251 IL2P60568 153 aa12.09□□□□□ -0.47
PDGFD-201ENST00000302251 TREML2Q5T2D2 321 aa12.09□□□□□ -0.47
PDGFD-201ENST00000302251 GPRIN3Q6ZVF9 776 aa12.09□□□□□ -0.47
PDGFD-201ENST00000302251 GLT6D1Q7Z4J2 308 aa12.09□□□□□ -0.47
PDGFD-201ENST00000302251 TRPV3Q8NET8 790 aa12.09□□□□□ -0.47
PDGFD-201ENST00000302251 LPPQ93052 612 aa12.09□□□□□ -0.47
PDGFD-201ENST00000302251 PPP1R2P1Q96PQ5 205 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms