RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 GOLGA8CPA6NN73 597 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 ZSCAN9O15535 394 aaPredicted RBP21.87■■□□□ 1.09
TPM4-201ENST00000300933 ATP6AP2O75787 350 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 IPO13O94829 963 aaKnown RBP21.87■■□□□ 1.09
TPM4-201ENST00000300933 ATXN3P54252 364 aaPredicted RBP21.87■■□□□ 1.09
TPM4-201ENST00000300933 TNK2Q07912 1038 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 TMED1Q13445 227 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 MYLK3Q32MK0 819 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 ANKRD33Q7Z3H0 272 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 BBS5Q8N3I7 341 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 TM6SF2Q9BZW4 377 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 RAI2Q9Y5P3 530 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 CHD5Q8TDI0 1954 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 H3BMM5 538 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 DNAJA2O60884 412 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 SUPT7LO94864 414 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 PRAMEF12O95522 483 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 CSF2RAP15509 400 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 PIK3R1P27986 724 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 PCSK6P29122 969 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 POLD2P49005 469 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 CYP4F8P98187 520 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 PPP1R3AQ16821 1122 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 KLC3Q6P597 504 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 KBTBD6Q86V97 674 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 CDK5RAP1Q96SZ6 601 aaKnown RBP21.87■■□□□ 1.09
TPM4-201ENST00000300933 CDYLQ9Y232 598 aa21.87■■□□□ 1.09
TPM4-201ENST00000300933 A0A1B0GVM2 712 aa21.86■■□□□ 1.09
TPM4-201ENST00000300933 TCAF2A6NFQ2 919 aa21.86■■□□□ 1.09
TPM4-201ENST00000300933 UBFD1O14562 309 aaKnown RBP21.86■■□□□ 1.09
TPM4-201ENST00000300933 OR1I1O60431 355 aa21.86■■□□□ 1.09
TPM4-201ENST00000300933 C1QTNF8P60827 252 aa21.86■■□□□ 1.09
TPM4-201ENST00000300933 PFKPQ01813 784 aa21.86■■□□□ 1.09
TPM4-201ENST00000300933 SULT2A1Q06520 285 aa21.86■■□□□ 1.09
TPM4-201ENST00000300933 TMEM259Q4ZIN3 620 aa21.86■■□□□ 1.09
TPM4-201ENST00000300933 TOP1MTQ969P6 601 aa21.86■■□□□ 1.09
TPM4-201ENST00000300933 ZNF558Q96NG5 402 aa21.86■■□□□ 1.09
TPM4-201ENST00000300933 BTBD9Q96Q07 612 aa21.86■■□□□ 1.09
TPM4-201ENST00000300933 EPB41L1Q9H4G0 881 aa21.86■■□□□ 1.09
TPM4-201ENST00000300933 A0A0J9YVX5 310 aa21.86■■□□□ 1.09
TPM4-201ENST00000300933 ATP5BP06576 529 aaKnown RBP21.86■■□□□ 1.09
TPM4-201ENST00000300933 GKP32189 559 aa21.86■■□□□ 1.09
TPM4-201ENST00000300933 GALK1P51570 392 aa21.86■■□□□ 1.09
TPM4-201ENST00000300933 MRNIPQ6NTE8 343 aa21.86■■□□□ 1.09
TPM4-201ENST00000300933 PIANPQ8IYJ0 282 aa21.86■■□□□ 1.09
TPM4-201ENST00000300933 RNF148Q8N7C7 305 aa21.86■■□□□ 1.09
TPM4-201ENST00000300933 VPS28Q9UK41 221 aa21.86■■□□□ 1.09
TPM4-201ENST00000300933 IMPDH2P12268 514 aa21.85■■□□□ 1.09
TPM4-201ENST00000300933 MYL4P12829 197 aa21.85■■□□□ 1.09
TPM4-201ENST00000300933 NUDT2P50583 147 aa21.85■■□□□ 1.09
TPM4-201ENST00000300933 NSUN2Q08J23 767 aaKnown RBP eCLIP21.85■■□□□ 1.09
TPM4-201ENST00000300933 OGFRL1Q5TC84 451 aaPredicted RBP21.85■■□□□ 1.09
TPM4-201ENST00000300933 SLC39A11Q8N1S5 342 aa21.85■■□□□ 1.09
TPM4-201ENST00000300933 SNRNP27Q8WVK2 155 aaKnown RBP21.85■■□□□ 1.09
TPM4-201ENST00000300933 PLD4Q96BZ4 506 aa21.85■■□□□ 1.09
TPM4-201ENST00000300933 TSPAN17Q96FV3 270 aa21.85■■□□□ 1.09
TPM4-201ENST00000300933 ZFRQ96KR1 1074 aaKnown RBP21.85■■□□□ 1.09
TPM4-201ENST00000300933 TDRD1Q9BXT4 1180 aaKnown RBP21.85■■□□□ 1.09
TPM4-201ENST00000300933 ILVBLA1L0T0 632 aa21.85■■□□□ 1.09
TPM4-201ENST00000300933 UBXN8O00124 270 aa21.85■■□□□ 1.09
TPM4-201ENST00000300933 CASQ2O14958 399 aaPredicted RBP21.85■■□□□ 1.09
TPM4-201ENST00000300933 CRTAMO95727 393 aa21.85■■□□□ 1.09
TPM4-201ENST00000300933 CTPS1P17812 591 aa21.85■■□□□ 1.09
TPM4-201ENST00000300933 CR2P20023 1033 aa21.85■■□□□ 1.09
TPM4-201ENST00000300933 PRKAA2P54646 552 aa21.85■■□□□ 1.09
TPM4-201ENST00000300933 TRAF2Q12933 501 aa21.85■■□□□ 1.09
TPM4-201ENST00000300933 VEPH1Q14D04 833 aa21.85■■□□□ 1.09
TPM4-201ENST00000300933 OR4D1Q15615 310 aa21.85■■□□□ 1.09
TPM4-201ENST00000300933 PQLC1Q8N2U9 271 aa21.85■■□□□ 1.09
TPM4-201ENST00000300933 ZNF599Q96NL3 588 aa21.85■■□□□ 1.09
TPM4-201ENST00000300933 SMG9Q9H0W8 520 aaKnown RBP21.85■■□□□ 1.09
TPM4-201ENST00000300933 FKBPLQ9UIM3 349 aa21.85■■□□□ 1.09
TPM4-201ENST00000300933 IKZF3Q9UKT9 509 aa21.85■■□□□ 1.09
TPM4-201ENST00000300933 CPQQ9Y646 472 aa21.85■■□□□ 1.09
TPM4-201ENST00000300933 ANKRD36A6QL64 1941 aa21.85■■□□□ 1.09
TPM4-201ENST00000300933 A8MX80 341 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 MAGEB3O15480 346 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 CFLARO15519 480 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 AP1G1O43747 822 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 EPOP01588 193 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 CDK4P11802 303 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 ACAP2Q15057 778 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 PIWIL4Q7Z3Z4 852 aaKnown RBP21.84■■□□□ 1.09
TPM4-201ENST00000300933 GALNT4Q8N4A0 578 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 MARVELD2Q8N4S9 558 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 ADAMTS19Q8TE59 1207 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 MYRFLQ96LU7 910 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 MRPL1Q9BYD6 325 aaKnown RBP21.84■■□□□ 1.09
TPM4-201ENST00000300933 CLEC4EQ9ULY5 219 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 PTGDR2Q9Y5Y4 395 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 AP4B1Q9Y6B7 739 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 AK5Q9Y6K8 562 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 ANAPC1Q9H1A4 1944 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 TEX28O15482 410 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 F11P03951 625 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 STC1P52823 247 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 MRPS22P82650 360 aaKnown RBP21.84■■□□□ 1.09
TPM4-201ENST00000300933 SEMG2Q02383 582 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 ACVR1Q04771 509 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 C6orf52Q5T4I8 152 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms