RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 NOL6Q9H6R4 1146 aaKnown RBP13.42□□□□□ -0.26
CTDP1-202ENST00000299543 AKTIPQ9H8T0 292 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 PALMDQ9NP74 551 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 SARS2Q9NP81 518 aaKnown RBP13.42□□□□□ -0.26
CTDP1-202ENST00000299543 MRGBPQ9NV56 204 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 RAB26Q9ULW5 256 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 NEU3Q9UQ49 428 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 PRSS51A0A1B0GVH4 220 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 SUPT3HB4E1H0 165 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 MT-ND1P03886 318 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 UGT1A1P22309 533 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 UGT1A4P22310 534 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 OR1E1P30953 314 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 UGT1A3P35503 534 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 UGT1A5P35504 534 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 ACVRL1P37023 503 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 HK2P52789 917 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 FOXA1P55317 472 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 IHHQ14623 411 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 TRIM16LQ309B1 348 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 BTLAQ7Z6A9 289 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 SPPL2CQ8IUH8 684 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 HPS1Q92902 700 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 GFM2Q969S9 779 aaKnown RBP13.41□□□□□ -0.26
CTDP1-202ENST00000299543 C12orf43Q96C57 262 aaKnown RBP13.41□□□□□ -0.26
CTDP1-202ENST00000299543 ASB9Q96DX5 294 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 CCDC126Q96EE4 140 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 C19orf60Q96EN9 201 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 UPF3AQ9H1J1 476 aaKnown RBP13.41□□□□□ -0.26
CTDP1-202ENST00000299543 A0A0J9YYE9 177 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 RNF103-CHMP3A0A140T963 221 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 SLC12A8A0AV02 714 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 DENRO43583 198 aaKnown RBP13.41□□□□□ -0.26
CTDP1-202ENST00000299543 SLC2A3P11169 496 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 ADSLP30566 484 aaPredicted RBP13.41□□□□□ -0.26
CTDP1-202ENST00000299543 HUNKP57058 714 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 SH3BP2P78314 561 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 ZNF235Q14590 738 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 HERC3Q15034 1050 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 POLD3Q15054 466 aaPredicted RBP13.41□□□□□ -0.26
CTDP1-202ENST00000299543 FGD3Q5JSP0 725 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 ZNF280BQ86YH2 543 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 STARD8Q92502 1023 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 IGSF8Q969P0 613 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 RMDN1Q96DB5 314 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 SERPINB11Q96P15 392 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 SMIM14Q96QK8 99 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 SLC25A23Q9BV35 468 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 SMOC2Q9H3U7 446 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.41□□□□□ -0.26
CTDP1-202ENST00000299543 ANGPT2O15123 496 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 CACNG3O60359 315 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 GLP2RO95838 553 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 GOT2P00505 430 aaKnown RBP13.41□□□□□ -0.26
CTDP1-202ENST00000299543 FMO4P31512 558 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 TUSC3Q13454 348 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 GRB7Q14451 532 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 ACAP2Q15057 778 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 GPR162Q16538 588 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 BCL2A1Q16548 175 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 MORN1Q5T089 497 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 KDELC1Q6UW63 502 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 RNF19BQ6ZMZ0 732 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 ISCA2Q86U28 154 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 TMEM102Q8N9M5 508 aaPredicted RBP13.41□□□□□ -0.26
CTDP1-202ENST00000299543 DNAJB14Q8TBM8 379 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 MTG1Q9BT17 334 aaPredicted RBP13.41□□□□□ -0.26
CTDP1-202ENST00000299543 EFHD1Q9BUP0 239 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 HERC2P3Q9BVR0 1158 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 COMMD10Q9Y6G5 202 aa13.41□□□□□ -0.26
CTDP1-202ENST00000299543 PIP5K1BO14986 540 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 AKR1A1P14550 325 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 LRP8Q14114 963 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 MAPRE1Q15691 268 aaKnown RBP13.4□□□□□ -0.26
CTDP1-202ENST00000299543 RAB44Q7Z6P3 723 aaPredicted RBP13.4□□□□□ -0.26
CTDP1-202ENST00000299543 PAF1Q8N7H5 531 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 PBXIP1Q96AQ6 731 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 FAR2Q96K12 515 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 TRIM62Q9BVG3 475 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 ZYG11BQ9C0D3 744 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 GSTO2Q9H4Y5 243 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 PCDHGA3Q9Y5H0 932 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 A0A0U1RQS6 177 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 IQCA1LA6NCM1 817 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 GLTPD2A6NH11 291 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 UNCXA6NJT0 531 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 SCAMP3O14828 347 aaKnown RBP13.4□□□□□ -0.26
CTDP1-202ENST00000299543 RAMP2O60895 175 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 GMNNO75496 209 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 BAIAP3O94812 1187 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 S1PR4O95977 384 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 HSPA8P11142 646 aaKnown RBP13.4□□□□□ -0.26
CTDP1-202ENST00000299543 LEPRP48357 1165 aaKnown RBP13.4□□□□□ -0.26
CTDP1-202ENST00000299543 CDK9P50750 372 aaKnown RBP13.4□□□□□ -0.26
CTDP1-202ENST00000299543 UNC50Q53HI1 259 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 FBXL22Q6P050 247 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 SLC22A9Q8IVM8 553 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 ZNF786Q8N393 782 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 IMP4Q96G21 291 aaKnown RBP13.4□□□□□ -0.26
CTDP1-202ENST00000299543 SEPT5Q99719 369 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms