RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 B3GALNT2Q8NCR0 500 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 OR13F1Q8NGS4 319 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 ZFP90Q8TF47 636 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 ANKRD49Q8WVL7 239 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 STARD8Q92502 1023 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 ELMO1Q92556 727 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 ESAMQ96AP7 390 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 NSUN5Q96P11 429 aaKnown RBP11.38□□□□□ -0.59
TRUB1-201ENST00000298746 UHRF1Q96T88 793 aaPredicted RBP11.38□□□□□ -0.59
TRUB1-201ENST00000298746 NANOGQ9H9S0 305 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.38□□□□□ -0.59
TRUB1-201ENST00000298746 DLGAP1O14490 977 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 BEST1O76090 585 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 RECQL4O94761 1208 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 CST1P01037 141 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 NPR3P17342 541 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 SHMT2P34897 504 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 GSSP48637 474 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 MRPS15P82914 257 aaKnown RBP11.38□□□□□ -0.59
TRUB1-201ENST00000298746 FOXD4Q12950 439 aaPredicted RBP11.38□□□□□ -0.59
TRUB1-201ENST00000298746 SLC13A2Q13183 592 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 TMEM236Q5W0B7 351 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 PAF1Q8N7H5 531 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 FLAD1Q8NFF5 587 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 GPR78Q96P69 363 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 NODALQ96S42 347 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 C6orf62Q9GZU0 229 aaPredicted RBP11.38□□□□□ -0.59
TRUB1-201ENST00000298746 MIR1-1HGQ9H1L0 117 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 SARS2Q9NP81 518 aaKnown RBP11.38□□□□□ -0.59
TRUB1-201ENST00000298746 PDGFCQ9NRA1 345 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 DNAJC15Q9Y5T4 150 aa11.38□□□□□ -0.59
TRUB1-201ENST00000298746 ZFC3H1O60293 1989 aaKnown RBP11.37□□□□□ -0.59
TRUB1-201ENST00000298746 G3V2T6 193 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 INMTO95050 263 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 KRT8P05787 483 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 CYP4B1P13584 511 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 IMPDH1P20839 514 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 PRKACGP22612 351 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 TCEA1P23193 301 aaKnown RBP11.37□□□□□ -0.59
TRUB1-201ENST00000298746 TAF6P49848 677 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 FOXA1P55317 472 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 VBP1P61758 197 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 CREB5Q02930 508 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 CBLBQ13191 982 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 LCN8Q6JVE9 175 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 DSG4Q86SJ6 1040 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 MICALL2Q8IY33 904 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 RAVER1Q8IY67 606 aaKnown RBP11.37□□□□□ -0.59
TRUB1-201ENST00000298746 FAM162AQ96A26 154 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 ZNF560Q96MR9 790 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 ALPK1Q96QP1 1244 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 TOR3AQ9H497 397 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 MARCH7Q9H992 704 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 SLAMF8Q9P0V8 285 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 NUDT5Q9UKK9 219 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 FAM50BQ9Y247 325 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 TARM1B6A8C7 271 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 H0Y858 1186 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 ASNA1O43681 348 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 NDUFS2O75306 463 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 MFN2O95140 757 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 ALOX5P09917 674 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 GPX3P22352 226 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 CCR1P32246 355 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 MLLT10P55197 1068 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 DNAJB13P59910 316 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 YBX1P67809 324 aaKnown RBP11.37□□□□□ -0.59
TRUB1-201ENST00000298746 SH3BP2P78314 561 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 DAG1Q14118 895 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 TTLL4Q14679 1199 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 FSCN1Q16658 493 aaKnown RBP11.37□□□□□ -0.59
TRUB1-201ENST00000298746 RSBN1Q5VWQ0 802 aaPredicted RBP11.37□□□□□ -0.59
TRUB1-201ENST00000298746 LARP4Q71RC2 724 aaKnown RBP eCLIP11.37□□□□□ -0.59
TRUB1-201ENST00000298746 FAM126BQ8IXS8 530 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 DCP1BQ8IZD4 617 aaKnown RBP11.37□□□□□ -0.59
TRUB1-201ENST00000298746 ABI1Q8IZP0 508 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 HS3ST5Q8IZT8 346 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 BLOC1S5Q8TDH9 187 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 AFG1LQ8WV93 481 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 SLC30A3Q99726 388 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 TUBA1CQ9BQE3 449 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 TRMOQ9BU70 441 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 COLEC11Q9BWP8 271 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 ASPSCR1Q9BZE9 553 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 NXF3Q9H4D5 531 aaKnown RBP11.37□□□□□ -0.59
TRUB1-201ENST00000298746 SIAEQ9HAT2 523 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 GLOD4Q9HC38 313 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 NT5MQ9NPB1 228 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 RNF112Q9ULX5 631 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 PIN4Q9Y237 131 aaKnown RBP11.37□□□□□ -0.59
TRUB1-201ENST00000298746 SCN1AP35498 2009 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 MYO1GB0I1T2 1018 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 UBFD1O14562 309 aaKnown RBP11.37□□□□□ -0.59
TRUB1-201ENST00000298746 SNPHO15079 494 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 XPNPEP2O43895 674 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 FPGSQ05932 587 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 CACNB2Q08289 660 aaPredicted RBP11.37□□□□□ -0.59
TRUB1-201ENST00000298746 GTF2H3Q13889 308 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 ACAP2Q15057 778 aa11.37□□□□□ -0.59
TRUB1-201ENST00000298746 C9orf57Q5W0N0 161 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms