RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 PAGE3Q5JUK9 113 aa24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 TFAP2CQ92754 450 aa24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 LRRC58Q96CX6 371 aa24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 CDK15Q96Q40 435 aa24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 SEPHS2Q99611 448 aa24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 HAUS8Q9BT25 410 aa24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 TRIM62Q9BVG3 475 aa24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 ASB1Q9Y576 335 aa24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 ARPC2O15144 300 aa24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 MAGEB3O15480 346 aa24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 GPR39O43194 453 aa24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 YAP1P46937 504 aaKnown RBP24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 CTBSQ01459 385 aa24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 CLCQ05315 142 aa24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 GALNT1Q10472 559 aaPredicted RBP24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 PPP4R4Q6NUP7 873 aa24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 ATOH8Q96SQ7 321 aa24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 UHRF1Q96T88 793 aaPredicted RBP24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 TRMOQ9BU70 441 aa24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 CCM2LQ9NUG4 571 aaPredicted RBP24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 RNF112Q9ULX5 631 aa24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 ARL1P40616 181 aaPredicted RBP24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 ACADVLP49748 655 aa24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 TAF1CQ15572 869 aaPredicted RBP24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 AAK1Q2M2I8 961 aa24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 TMEM259Q4ZIN3 620 aa24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 C10orf120Q5SQS8 335 aa24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 TTC33Q6PID6 262 aaPredicted RBP24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 MRPL10Q7Z7H8 261 aaKnown RBP24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 CLVS1Q8IUQ0 354 aaPredicted RBP24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 SUSD3Q96L08 255 aa24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 PHF24Q9UPV7 400 aa24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 A0A0U1RQF3 1178 aa24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 SLC12A8A0AV02 714 aa24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 NPEPPSL1A6NEC2 478 aa24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 PAPSS2O95340 614 aaPredicted RBP24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 OR1G1P47890 313 aa24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 UFM1P61960 85 aa24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 MAPRE1Q15691 268 aaKnown RBP24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 MSANTD2Q6P1R3 559 aa24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 RAB44Q7Z6P3 723 aaPredicted RBP24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 SCML4Q8N228 414 aa24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 OR4L1Q8NH43 312 aa24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 GABPB2Q8TAK5 448 aaPredicted RBP24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 CATSPERZQ9NTU4 200 aa24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 TMEM248Q9NWD8 314 aa24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 EVLQ9UI08 416 aaPredicted RBP24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 SPO11Q9Y5K1 396 aa24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 FNDC1Q4ZHG4 1894 aaPredicted RBP24.29■■□□□ 1.48
SPTSSA-201ENST00000298130 LOC285095A0A1B0GVY8 99 aa24.28■■□□□ 1.48
SPTSSA-201ENST00000298130 MAPK10P53779 464 aa24.28■■□□□ 1.48
SPTSSA-201ENST00000298130 NFYCQ13952 458 aa24.28■■□□□ 1.48
SPTSSA-201ENST00000298130 ZNF235Q14590 738 aa24.28■■□□□ 1.48
SPTSSA-201ENST00000298130 MON1AQ86VX9 555 aa24.28■■□□□ 1.48
SPTSSA-201ENST00000298130 ANKFN1Q8N957 763 aa24.28■■□□□ 1.48
SPTSSA-201ENST00000298130 GAB3Q8WWW8 586 aa24.28■■□□□ 1.48
SPTSSA-201ENST00000298130 PPP1R2P1Q96PQ5 205 aa24.28■■□□□ 1.48
SPTSSA-201ENST00000298130 MTG1Q9BT17 334 aaPredicted RBP24.28■■□□□ 1.48
SPTSSA-201ENST00000298130 ZBED2Q9BTP6 218 aa24.28■■□□□ 1.48
SPTSSA-201ENST00000298130 ANKRD60Q9BZ19 345 aa24.28■■□□□ 1.48
SPTSSA-201ENST00000298130 CLK4Q9HAZ1 481 aaKnown RBP24.28■■□□□ 1.48
SPTSSA-201ENST00000298130 CDC14AQ9UNH5 594 aa24.28■■□□□ 1.48
SPTSSA-201ENST00000298130 BMP2P12643 396 aa24.28■■□□□ 1.48
SPTSSA-201ENST00000298130 LBPP18428 481 aa24.28■■□□□ 1.48
SPTSSA-201ENST00000298130 PLCL1Q15111 1095 aa24.28■■□□□ 1.48
SPTSSA-201ENST00000298130 FBXO39Q8N4B4 442 aa24.28■■□□□ 1.48
SPTSSA-201ENST00000298130 ROPN1LQ96C74 230 aa24.28■■□□□ 1.48
SPTSSA-201ENST00000298130 DTNBP1Q96EV8 351 aa24.28■■□□□ 1.48
SPTSSA-201ENST00000298130 ADI1Q9BV57 179 aa24.28■■□□□ 1.48
SPTSSA-201ENST00000298130 EI24O14681 340 aa24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 ECI2O75521 394 aa24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 RGRP47804 291 aa24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 MGAT3Q09327 533 aa24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 TRIM32Q13049 653 aa24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 LPIN1Q14693 890 aa24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 KANK2Q63ZY3 851 aa24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 BEND5Q7L4P6 421 aa24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 SERINC5Q86VE9 423 aa24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 DRAXINQ8NBI3 349 aaPredicted RBP24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 OR7D4Q8NG98 312 aa24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 ABTB1Q969K4 478 aaPredicted RBP24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 C1orf74Q96LT6 269 aa24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 SPON2Q9BUD6 331 aa24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 BPIFA1Q9NP55 256 aa24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 INTS7Q9NVH2 962 aaKnown RBP24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 ASPDHA6ND91 283 aa24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 OR1I1O60431 355 aa24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 PSMA4P25789 261 aaKnown RBP24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 TIGD2Q4W5G0 525 aa24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 SETMARQ53H47 684 aaPredicted RBP24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 MRNIPQ6NTE8 343 aa24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 RIN3Q8TB24 985 aa24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 GPR21Q99679 349 aa24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 SARS2Q9NP81 518 aaKnown RBP24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 MED16Q9Y2X0 877 aa24.27■■□□□ 1.48
SPTSSA-201ENST00000298130 ALDH3B2P48448 385 aa24.26■■□□□ 1.47
SPTSSA-201ENST00000298130 KCNQ1P51787 676 aa24.26■■□□□ 1.47
SPTSSA-201ENST00000298130 CREB5Q02930 508 aa24.26■■□□□ 1.47
SPTSSA-201ENST00000298130 ADGRG5Q8IZF4 528 aa24.26■■□□□ 1.47
SPTSSA-201ENST00000298130 OR4K2Q8NGD2 314 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms