RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 TTKP33981 857 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 CAPZA2P47755 286 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 CXCR3P49682 368 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 TPSAB1Q15661 275 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 VARS2Q5ST30 1063 aaKnown RBP13.41□□□□□ -0.26
HPS3-201ENST00000296051 ESRP1Q6NXG1 681 aaKnown RBP13.41□□□□□ -0.26
HPS3-201ENST00000296051 EFL1Q7Z2Z2 1120 aaKnown RBP13.41□□□□□ -0.26
HPS3-201ENST00000296051 DRAXINQ8NBI3 349 aaPredicted RBP13.41□□□□□ -0.26
HPS3-201ENST00000296051 NTPCRQ9BSD7 190 aaKnown RBP13.41□□□□□ -0.26
HPS3-201ENST00000296051 PARVBQ9HBI1 364 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 ARHGEF4Q9NR80 690 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 GULP1Q9UBP9 304 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 CAB39Q9Y376 341 aaPredicted RBP13.41□□□□□ -0.26
HPS3-201ENST00000296051 RFPL1O75677 317 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 APODP05090 189 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 MATKP42679 507 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 MSLNQ13421 630 aaPredicted RBP13.41□□□□□ -0.26
HPS3-201ENST00000296051 RAB6CQ53S08 254 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 TJAP1Q5JTD0 557 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 ARMC4Q5T2S8 1044 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 DET1Q7L5Y6 550 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 ST13P5Q8NFI4 369 aaPredicted RBP13.41□□□□□ -0.26
HPS3-201ENST00000296051 MCOLN3Q8TDD5 553 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 KLHL5Q96PQ7 755 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 RAB6CQ9H0N0 254 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 ASB8Q9H765 288 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 GMIPQ9P107 970 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 COQ6Q9Y2Z9 468 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 SEC22BO75396 215 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 PAX3P23760 479 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 TLR1Q15399 786 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 DGUOKQ16854 277 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 ARHGAP17Q68EM7 881 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 SPPL2AQ8TCT8 520 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 CXorf40BQ96DE9 158 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 EPB41L1Q9H4G0 881 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 ATP13A3Q9H7F0 1226 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 CNGB3Q9NQW8 809 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 CACNG4Q9UBN1 327 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 PCDHGC3Q9UN70 934 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 MFHAS1Q9Y4C4 1052 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 IRS2Q9Y4H2 1338 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 A0A088AWK7 358 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 TAS2R39P59534 338 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 TMEM26Q6ZUK4 368 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 ARL14EPQ8N8R7 260 aaPredicted RBP13.4□□□□□ -0.26
HPS3-201ENST00000296051 COX4I2Q96KJ9 171 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 DUSP16Q9BY84 665 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 OXCT2Q9BYC2 517 aaPredicted RBP13.4□□□□□ -0.26
HPS3-201ENST00000296051 PDZD7Q9H5P4 517 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 FANCEQ9HB96 536 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 BPIFA1Q9NP55 256 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 MRPS17Q9Y2R5 130 aaKnown RBP13.4□□□□□ -0.26
HPS3-201ENST00000296051 GSNP06396 782 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 AOC1P19801 751 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 PIK3CGP48736 1102 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 SIM2Q14190 667 aaPredicted RBP13.4□□□□□ -0.26
HPS3-201ENST00000296051 PRMT9Q6P2P2 845 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 LCLAT1Q6UWP7 414 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 PLD6Q8N2A8 252 aaKnown RBP13.4□□□□□ -0.26
HPS3-201ENST00000296051 OR2T34Q8NGX1 318 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 OR2T3Q8NH03 318 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 ADI1Q9BV57 179 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 RHBGQ9H310 441 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 DPEP3Q9H4B8 488 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 FETUBQ9UGM5 382 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 INVSQ9Y283 1065 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 A0A1W2PPW3 197 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 A0A1W2PQH9 124 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 E7ENX8 843 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 BOLA2-SMG1P6H3BVE0 249 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 KCNH1O95259 989 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 ABCB1P08183 1280 aaPredicted RBP13.4□□□□□ -0.26
HPS3-201ENST00000296051 PTPN2P17706 415 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 CTPS1P17812 591 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 CES1P23141 567 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 GPD2P43304 727 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 ST13P50502 369 aaKnown RBP13.4□□□□□ -0.26
HPS3-201ENST00000296051 MRPS5P82675 430 aaKnown RBP13.4□□□□□ -0.26
HPS3-201ENST00000296051 CCDC142Q17RM4 750 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 SLCO6A1Q86UG4 719 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 STX19Q8N4C7 294 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 PIWIL1Q96J94 861 aaKnown RBP13.4□□□□□ -0.26
HPS3-201ENST00000296051 TRIM39Q9HCM9 518 aa13.4□□□□□ -0.26
HPS3-201ENST00000296051 TRAFD1O14545 582 aaPredicted RBP13.39□□□□□ -0.27
HPS3-201ENST00000296051 SNAP91O60641 907 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 RNASEH2AO75792 299 aaKnown RBP13.39□□□□□ -0.27
HPS3-201ENST00000296051 SERPINH1P50454 418 aaKnown RBP13.39□□□□□ -0.27
HPS3-201ENST00000296051 BLVRAP53004 296 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 SLC25A11Q02978 314 aaKnown RBP13.39□□□□□ -0.27
HPS3-201ENST00000296051 KCNJ11Q14654 390 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 SNAP47Q5SQN1 464 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 VPS33AQ96AX1 596 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 ALG2Q9H553 416 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 TAS2R13Q9NYV9 303 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 TBC1D14Q9P2M4 693 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 MAFBQ9Y5Q3 323 aaPredicted RBP13.39□□□□□ -0.27
HPS3-201ENST00000296051 LSM1O15116 133 aaKnown RBP13.39□□□□□ -0.27
HPS3-201ENST00000296051 NFATC1O95644 943 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 CST1P01037 141 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms