RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 PDE1BQ01064 536 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 LAMB3Q13751 1172 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 CHRNA6Q15825 494 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 UAP1Q16222 522 aaPredicted RBP15.09■□□□□ 0.01
CCDC140-201ENST00000295226 USP39Q53GS9 565 aaKnown RBP15.09■□□□□ 0.01
CCDC140-201ENST00000295226 TTMPQ5BVD1 217 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 SPANXN3Q5MJ09 141 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 LDB1Q86U70 411 aaPredicted RBP15.09■□□□□ 0.01
CCDC140-201ENST00000295226 ARL8AQ96BM9 186 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 DTD2Q96FN9 168 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 NAT9Q9BTE0 207 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 SLC17A9Q9BYT1 436 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 KDM4CQ9H3R0 1056 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 FAM83DQ9H4H8 585 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 UGT1A7Q9HAW7 530 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 UGT1A10Q9HAW8 530 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 UGT1A8Q9HAW9 530 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 PPANQ9NQ55 473 aaKnown RBP15.09■□□□□ 0.01
CCDC140-201ENST00000295226 MBNL1Q9NR56 388 aaKnown RBP15.09■□□□□ 0.01
CCDC140-201ENST00000295226 C20orf96Q9NUD7 363 aaPredicted RBP15.09■□□□□ 0.01
CCDC140-201ENST00000295226 CA5BQ9Y2D0 317 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 NFS1Q9Y697 457 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 TCRBV9S1A1TA0A576 114 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 PSMD11O00231 422 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 RIPK2O43353 540 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 NDUFS2O75306 463 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 IGHV4-34P06331 123 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 HOXA6P31267 233 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 SPAM1P38567 509 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 ACVR1Q04771 509 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 SGCGQ13326 291 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 EFTUD2Q15029 972 aaKnown RBP eCLIP15.08■□□□□ 0
CCDC140-201ENST00000295226 WSCD2Q2TBF2 565 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 HSP90AA5PQ58FG0 334 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 KIAA1161Q6NSJ0 714 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 CCNJLQ8IV13 435 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 PLA2G15Q8NCC3 412 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 GSDMBQ8TAX9 411 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 FBF1Q8TES7 1133 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 AP2M1Q96CW1 435 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 NUS1Q96E22 293 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 SPATA16Q9BXB7 569 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 C1QTNF2Q9BXJ5 285 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 CAPS2Q9BXY5 557 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 SMYD2Q9NRG4 433 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 MARCH4Q9P2E8 410 aaPredicted RBP15.08■□□□□ 0
CCDC140-201ENST00000295226 RIMKLBQ9ULI2 386 aa15.08■□□□□ 0
CCDC140-201ENST00000295226 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.07■□□□□ 0
CCDC140-201ENST00000295226 GLYATL1P3A0A0U1RQE8 302 aa15.07■□□□□ 0
CCDC140-201ENST00000295226 SRRM3A6NNA2 597 aaPredicted RBP15.07■□□□□ 0
CCDC140-201ENST00000295226 CXorf49A8MYA2 514 aaPredicted RBP15.07■□□□□ 0
CCDC140-201ENST00000295226 MAP3K13O43283 966 aa15.07■□□□□ 0
CCDC140-201ENST00000295226 PCCBP05166 539 aa15.07■□□□□ 0
CCDC140-201ENST00000295226 PSMA3P25788 255 aa15.07■□□□□ 0
CCDC140-201ENST00000295226 HADHAP40939 763 aa15.07■□□□□ 0
CCDC140-201ENST00000295226 RPL6Q02878 288 aaKnown RBP15.07■□□□□ 0
CCDC140-201ENST00000295226 SLC29A2Q14542 456 aa15.07■□□□□ 0
CCDC140-201ENST00000295226 ZSCAN26Q16670 478 aa15.07■□□□□ 0
CCDC140-201ENST00000295226 LONRF1Q17RB8 773 aa15.07■□□□□ 0
CCDC140-201ENST00000295226 ZRANB3Q5FWF4 1079 aa15.07■□□□□ 0
CCDC140-201ENST00000295226 KIAA0895LQ68EN5 471 aa15.07■□□□□ 0
CCDC140-201ENST00000295226 KIAA0930Q6ICG6 404 aaPredicted RBP15.07■□□□□ 0
CCDC140-201ENST00000295226 NEK5Q6P3R8 708 aa15.07■□□□□ 0
CCDC140-201ENST00000295226 TRMT10CQ7L0Y3 403 aaKnown RBP15.07■□□□□ 0
CCDC140-201ENST00000295226 WDR5BQ86VZ2 330 aa15.07■□□□□ 0
CCDC140-201ENST00000295226 PIANPQ8IYJ0 282 aa15.07■□□□□ 0
CCDC140-201ENST00000295226 TMEFF1Q8IYR6 380 aa15.07■□□□□ 0
CCDC140-201ENST00000295226 SNX19Q92543 992 aa15.07■□□□□ 0
CCDC140-201ENST00000295226 BIRC7Q96CA5 298 aa15.07■□□□□ 0
CCDC140-201ENST00000295226 MRRFQ96E11 262 aaKnown RBP15.07■□□□□ 0
CCDC140-201ENST00000295226 IARS2Q9NSE4 1012 aaKnown RBP15.07■□□□□ 0
CCDC140-201ENST00000295226 SLCO1B1Q9Y6L6 691 aa15.07■□□□□ 0
CCDC140-201ENST00000295226 USP34Q70CQ2 3546 aa15.07■□□□□ 0
CCDC140-201ENST00000295226 ERICH4A6NGS2 130 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 FADS2P1A8MWK0 482 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 SRP72O76094 671 aaKnown RBP15.06■□□□□ 0
CCDC140-201ENST00000295226 PRAMEF1O95521 474 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 MAOBP27338 520 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 CLDN2P57739 230 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 CREB5Q02930 508 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 ZNF844Q08AG5 666 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 SEMA3AQ14563 771 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 ANGPT1Q15389 498 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 ATP13A5Q4VNC0 1218 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 HENMT1Q5T8I9 393 aaKnown RBP15.06■□□□□ 0
CCDC140-201ENST00000295226 KCNMB4Q86W47 210 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 TRIM69Q86WT6 500 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 OR4L1Q8NH43 312 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 NAT14Q8WUY8 206 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 CERS2Q96G23 380 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 SPACA7Q96KW9 195 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 TTC25Q96NG3 672 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 MOCS1Q9NZB8 636 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 TMPRSS11EQ9UL52 423 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 CUL9Q8IWT3 2517 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 KMT2EQ8IZD2 1858 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 C10orf142B7Z368 130 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 INPP4BO15327 924 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 HRO43593 1189 aa15.06■□□□□ 0
CCDC140-201ENST00000295226 SHBGP04278 402 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms