RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 OR52K1Q8NGK4 314 aa26.75■■□□□ 1.87
SSU72-201ENST00000291386 HIC2Q96JB3 615 aa26.75■■□□□ 1.87
SSU72-201ENST00000291386 BPIFA1Q9NP55 256 aa26.75■■□□□ 1.87
SSU72-201ENST00000291386 CNOT6Q9ULM6 557 aaKnown RBP26.75■■□□□ 1.87
SSU72-201ENST00000291386 ARL5AQ9Y689 179 aa26.75■■□□□ 1.87
SSU72-201ENST00000291386 DGKBQ9Y6T7 804 aa26.75■■□□□ 1.87
SSU72-201ENST00000291386 TMEM202A6NGA9 273 aa26.74■■□□□ 1.87
SSU72-201ENST00000291386 FADS2P1A8MWK0 482 aa26.74■■□□□ 1.87
SSU72-201ENST00000291386 STX7O15400 261 aaKnown RBP26.74■■□□□ 1.87
SSU72-201ENST00000291386 CSRP1P21291 193 aaKnown RBP26.74■■□□□ 1.87
SSU72-201ENST00000291386 IL9RQ01113 521 aa26.74■■□□□ 1.87
SSU72-201ENST00000291386 GPS1Q13098 491 aa26.74■■□□□ 1.87
SSU72-201ENST00000291386 PUM1Q14671 1186 aaKnown RBP eCLIP26.74■■□□□ 1.872e-6■■■□□ 16.5
SSU72-201ENST00000291386 ALG11Q2TAA5 492 aa26.74■■□□□ 1.87
SSU72-201ENST00000291386 ZNF542PQ5EBM4 170 aa26.74■■□□□ 1.87
SSU72-201ENST00000291386 PHACTR4Q8IZ21 702 aa26.74■■□□□ 1.87
SSU72-201ENST00000291386 FRMD8Q9BZ67 464 aaPredicted RBP26.74■■□□□ 1.87
SSU72-201ENST00000291386 KLQ9UEF7 1012 aa26.74■■□□□ 1.87
SSU72-201ENST00000291386 MYLKQ15746 1914 aa26.74■■□□□ 1.87
SSU72-201ENST00000291386 DMXL1Q9Y485 3027 aa26.74■■□□□ 1.87
SSU72-201ENST00000291386 LDB2O43679 373 aa26.73■■□□□ 1.87
SSU72-201ENST00000291386 RASGRP1O95267 797 aa26.73■■□□□ 1.87
SSU72-201ENST00000291386 JUNDP17535 347 aa26.73■■□□□ 1.87
SSU72-201ENST00000291386 DGKAP23743 735 aa26.73■■□□□ 1.87
SSU72-201ENST00000291386 SPAM1P38567 509 aa26.73■■□□□ 1.87
SSU72-201ENST00000291386 HK3P52790 923 aa26.73■■□□□ 1.87
SSU72-201ENST00000291386 SRP54P61011 504 aaKnown RBP26.73■■□□□ 1.87
SSU72-201ENST00000291386 ALS2CLQ60I27 953 aa26.73■■□□□ 1.87
SSU72-201ENST00000291386 PPP1R21Q6ZMI0 780 aa26.73■■□□□ 1.87
SSU72-201ENST00000291386 NAXDQ8IW45 347 aa26.73■■□□□ 1.87
SSU72-201ENST00000291386 DNAAF3Q8N9W5 541 aa26.73■■□□□ 1.87
SSU72-201ENST00000291386 SPATA16Q9BXB7 569 aa26.73■■□□□ 1.87
SSU72-201ENST00000291386 IL26Q9NPH9 171 aa26.73■■□□□ 1.87
SSU72-201ENST00000291386 SLC17A4Q9Y2C5 497 aa26.73■■□□□ 1.87
SSU72-201ENST00000291386 AP3B1O00203 1094 aa26.72■■□□□ 1.87
SSU72-201ENST00000291386 CEACAM5P06731 702 aa26.72■■□□□ 1.87
SSU72-201ENST00000291386 TPH1P17752 444 aa26.72■■□□□ 1.87
SSU72-201ENST00000291386 PSMA3P25788 255 aa26.72■■□□□ 1.87
SSU72-201ENST00000291386 GRIA1P42261 906 aa26.72■■□□□ 1.87
SSU72-201ENST00000291386 PTGIRP43119 386 aa26.72■■□□□ 1.87
SSU72-201ENST00000291386 GRK6P43250 576 aa26.72■■□□□ 1.87
SSU72-201ENST00000291386 ZNF140P52738 457 aaPredicted RBP26.72■■□□□ 1.87
SSU72-201ENST00000291386 KCNJ11Q14654 390 aa26.72■■□□□ 1.87
SSU72-201ENST00000291386 INAVAQ3KP66 663 aa26.72■■□□□ 1.87
SSU72-201ENST00000291386 GATAD2AQ86YP4 633 aa26.72■■□□□ 1.87
SSU72-201ENST00000291386 OR4K2Q8NGD2 314 aa26.72■■□□□ 1.87
SSU72-201ENST00000291386 SCARF2Q96GP6 870 aaPredicted RBP26.72■■□□□ 1.87
SSU72-201ENST00000291386 VPS35Q96QK1 796 aa26.72■■□□□ 1.87
SSU72-201ENST00000291386 RANBP9Q96S59 729 aa26.72■■□□□ 1.87
SSU72-201ENST00000291386 FGF22Q9HCT0 170 aa26.72■■□□□ 1.87
SSU72-201ENST00000291386 APOBEC3BQ9UH17 382 aaKnown RBP26.72■■□□□ 1.87
SSU72-201ENST00000291386 CSNK1G3Q9Y6M4 447 aa26.72■■□□□ 1.87
SSU72-201ENST00000291386 KIF2AO00139 706 aaPredicted RBP26.71■■□□□ 1.87
SSU72-201ENST00000291386 BUD23O43709 281 aaKnown RBP26.71■■□□□ 1.87
SSU72-201ENST00000291386 SH3BP5O60239 455 aa26.71■■□□□ 1.87
SSU72-201ENST00000291386 TNFP01375 233 aa26.71■■□□□ 1.87
SSU72-201ENST00000291386 ID4P47928 161 aa26.71■■□□□ 1.87
SSU72-201ENST00000291386 LAMB3Q13751 1172 aa26.71■■□□□ 1.87
SSU72-201ENST00000291386 SYDE1Q6ZW31 735 aaPredicted RBP26.71■■□□□ 1.87
SSU72-201ENST00000291386 SLC25A45Q8N413 288 aa26.71■■□□□ 1.87
SSU72-201ENST00000291386 ZNF548Q8NEK5 533 aaPredicted RBP26.71■■□□□ 1.87
SSU72-201ENST00000291386 OR1E3Q8WZA6 343 aa26.71■■□□□ 1.87
SSU72-201ENST00000291386 TSACCQ96A04 125 aaPredicted RBP26.71■■□□□ 1.87
SSU72-201ENST00000291386 SLC13A1Q9BZW2 595 aa26.71■■□□□ 1.87
SSU72-201ENST00000291386 SPASTQ9UBP0 616 aa26.71■■□□□ 1.87
SSU72-201ENST00000291386 KCTD3Q9Y597 815 aa26.71■■□□□ 1.87
SSU72-201ENST00000291386 COL5A1P20908 1838 aaPredicted RBP26.7■■□□□ 1.87
SSU72-201ENST00000291386 GLYATL1P3A0A0U1RQE8 302 aa26.7■■□□□ 1.86
SSU72-201ENST00000291386 PRSS38A1L453 326 aa26.7■■□□□ 1.86
SSU72-201ENST00000291386 MROH6A6NGR9 719 aa26.7■■□□□ 1.86
SSU72-201ENST00000291386 GAPDHSO14556 408 aaPredicted RBP26.7■■□□□ 1.86
SSU72-201ENST00000291386 SDC3O75056 442 aa26.7■■□□□ 1.86
SSU72-201ENST00000291386 CBFA2T3O75081 653 aa26.7■■□□□ 1.86
SSU72-201ENST00000291386 IVLP07476 585 aa26.7■■□□□ 1.86
SSU72-201ENST00000291386 HADHAP40939 763 aa26.7■■□□□ 1.86
SSU72-201ENST00000291386 VPS41P49754 854 aa26.7■■□□□ 1.86
SSU72-201ENST00000291386 PTK6Q13882 451 aa26.7■■□□□ 1.86
SSU72-201ENST00000291386 POU6F1Q14863 301 aa26.7■■□□□ 1.86
SSU72-201ENST00000291386 KCTD19Q17RG1 926 aaPredicted RBP26.7■■□□□ 1.86
SSU72-201ENST00000291386 HID1Q8IV36 788 aa26.7■■□□□ 1.86
SSU72-201ENST00000291386 RBFAQ8N0V3 343 aa26.7■■□□□ 1.86
SSU72-201ENST00000291386 SDR16C5Q8N3Y7 309 aa26.7■■□□□ 1.86
SSU72-201ENST00000291386 BAHD1Q8TBE0 780 aaPredicted RBP26.7■■□□□ 1.86
SSU72-201ENST00000291386 CPT1BQ92523 772 aa26.7■■□□□ 1.86
SSU72-201ENST00000291386 PDXPQ96GD0 296 aa26.7■■□□□ 1.86
SSU72-201ENST00000291386 TCEAL2Q9H3H9 227 aaPredicted RBP26.7■■□□□ 1.86
SSU72-201ENST00000291386 SLC32A1Q9H598 525 aa26.7■■□□□ 1.86
SSU72-201ENST00000291386 PIH1D1Q9NWS0 290 aaKnown RBP26.7■■□□□ 1.86
SSU72-201ENST00000291386 UCKL1Q9NWZ5 548 aa26.7■■□□□ 1.86
SSU72-201ENST00000291386 VPS18Q9P253 973 aa26.7■■□□□ 1.86
SSU72-201ENST00000291386 APPL1Q9UKG1 709 aa26.7■■□□□ 1.86
SSU72-201ENST00000291386 PCOLCE2Q9UKZ9 415 aa26.7■■□□□ 1.86
SSU72-201ENST00000291386 RIMKLBQ9ULI2 386 aa26.7■■□□□ 1.86
SSU72-201ENST00000291386 ARID1BQ8NFD5 2236 aaPredicted RBP26.7■■□□□ 1.86
SSU72-201ENST00000291386 NEMP2A6NFY4 417 aa26.69■■□□□ 1.86
SSU72-201ENST00000291386 H7C0S8 307 aa26.69■■□□□ 1.86
SSU72-201ENST00000291386 SCAMP1O15126 338 aa26.69■■□□□ 1.86
SSU72-201ENST00000291386 INPP4BO15327 924 aa26.69■■□□□ 1.86
SSU72-201ENST00000291386 DNAH14Q0VDD8 3507 aa26.69■■□□□ 1.86
SSU72-201ENST00000291386 PTPRCAPQ14761 206 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms