RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 RPS14P62263 151 aaKnown RBP8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 CASP8Q14790 479 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 CST6Q15828 149 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 SGO1Q5FBB7 561 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 TJAP1Q5JTD0 557 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 CERCAMQ5T4B2 595 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 GLT6D1Q7Z4J2 308 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 NLRP8Q86W28 1048 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 KRT222Q8N1A0 295 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 CALML6Q8TD86 181 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 HIST1H2AHQ96KK5 128 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 KLHL32Q96NJ5 620 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 HIST1H2AJQ99878 128 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 H2AFJQ9BTM1 129 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 DHRS4Q9BTZ2 278 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 CHRDQ9H2X0 955 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 CHMP2BQ9UQN3 213 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 ZCWPW2A0A1B0GU75 182 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 EXOC1LA0A1B0GW35 172 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 NOL3O60936 208 aaKnown RBP8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 UGT2B4P06133 528 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 HOXB2P14652 356 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 HMGCLP35914 325 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 DGKEP52429 567 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 SEC13P55735 322 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 TAF1BQ53T94 588 aaPredicted RBP8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 AFTPHQ6ULP2 937 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 ERN2Q76MJ5 926 aaKnown RBP8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 MARK2Q7KZI7 788 aaKnown RBP8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 PARS2Q7L3T8 475 aaKnown RBP8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 CYP2U1Q7Z449 544 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 IGDCC3Q8IVU1 814 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 RAB42Q8N4Z0 105 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 PJA1Q8NG27 643 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 ASB12Q8WXK4 309 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 SPDL1Q96EA4 605 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 PLEKHG4BQ96PX9 1271 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 PLAC1Q9HBJ0 212 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 ZNF180Q9UJW8 692 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 PCDHB9Q9Y5E1 797 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 SPTBN1Q01082 2364 aaKnown RBP8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 SPTBN5Q9NRC6 3674 aaKnown RBP8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 CFAP99D6REC4 459 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 C1QAP02745 245 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 GFAPP14136 432 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 NCF2P19878 526 aaPredicted RBP8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 LPOP22079 712 aaPredicted RBP8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 THOP1P52888 689 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 CREB5Q02930 508 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 FZD5Q13467 585 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 FASTKD3Q14CZ7 662 aaKnown RBP8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 KIF19Q2TAC6 998 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 ANKRD20A4Q4UJ75 823 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 TMEM259Q4ZIN3 620 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 LYPLAL1Q5VWZ2 237 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 PTRHD1Q6GMV3 140 aaKnown RBP8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 NEK5Q6P3R8 708 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 MDGA1Q8NFP4 955 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 RPLP0P6Q8NHW5 317 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 GRIN3AQ8TCU5 1115 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 ARRDC3Q96B67 414 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 FOPNLQ96NB1 174 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 CYTH2Q99418 400 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 SEMA4AQ9H3S1 761 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 POLMQ9NP87 494 aaPredicted RBP8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 CA14Q9ULX7 337 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 NFS1Q9Y697 457 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 ABCA4P78363 2273 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 KRBA1A5PL33 1030 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 C10orf142B7Z368 130 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 ZSCAN9O15535 394 aaPredicted RBP8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 TSPAN6O43657 245 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 USP12O75317 370 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 PYGLP06737 847 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 ADRB3P13945 408 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 CNTFP26441 200 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 TARSP26639 723 aaKnown RBP8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 TEAD1P28347 426 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 HNF1BP35680 557 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 CHRNA4P43681 627 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 POLD2P49005 469 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 UGP2Q16851 508 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 TTC31Q49AM3 519 aaPredicted RBP8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 FASTKD1Q53R41 847 aaKnown RBP8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 ZRANB3Q5FWF4 1079 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 KBTBD6Q86V97 674 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 ZSWIM9Q86XI8 627 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 PWWP2AQ96N64 755 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 TACO1Q9BSH4 297 aaKnown RBP8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 FAM126AQ9BYI3 521 aaPredicted RBP8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 STN1Q9H668 368 aaKnown RBP8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 PREBQ9HCU5 417 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 PKD2L2Q9NZM6 624 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 RABGEF1Q9UJ41 708 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 PLRG1O43660 514 aaKnown RBP8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 NDUFS3O75489 264 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 HLA-EP13747 358 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 OGNP20774 298 aaKnown RBP8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 STC1P52823 247 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 SIGLEC14Q08ET2 396 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms