RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 A0A1W2PQ45 241 aaPredicted RBP18.46■□□□□ 0.55
PCDH1-201ENST00000287008 A0A1W2PQY0 241 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 NPEPPSL1A6NEC2 478 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 MYL12BO14950 172 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 SASH3O75995 380 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 COX4I1P13073 169 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 GDI1P31150 447 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 GJA9P57773 515 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 EPS8Q12929 822 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 TSNQ15631 228 aaKnown RBP18.46■□□□□ 0.55
PCDH1-201ENST00000287008 ZNF248Q8NDW4 579 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 LCN9Q8WX39 176 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 PTCD3Q96EY7 689 aaKnown RBP18.46■□□□□ 0.55
PCDH1-201ENST00000287008 ATG10Q9H0Y0 220 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 SPAG4Q9NPE6 437 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 GKN1Q9NS71 199 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 EXD2Q9NVH0 621 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 ADAM30Q9UKF2 790 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 RHPN2P1A8MT19 583 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 TRAFD1O14545 582 aaPredicted RBP18.46■□□□□ 0.55
PCDH1-201ENST00000287008 FPGTO14772 594 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 TBX18O95935 607 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 HNRNPCP07910 306 aaKnown RBP eCLIP18.46■□□□□ 0.55
PCDH1-201ENST00000287008 AKT2P31751 481 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 GRIA3P42263 894 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 GNPDA1P46926 289 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 TMEM63BQ5T3F8 832 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 NEK10Q6ZWH5 1172 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 CUZD1Q86UP6 607 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 HID1Q8IV36 788 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 C2orf73Q8N5S3 287 aaPredicted RBP18.46■□□□□ 0.55
PCDH1-201ENST00000287008 BRSK1Q8TDC3 778 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 ITCHQ96J02 903 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 PNPLA8Q9NP80 782 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 CD84Q9UIB8 345 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 PMM2O15305 246 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 BMP7P18075 431 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 KIAA2013Q8IYS2 634 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 RP9Q8TA86 221 aaKnown RBP18.46■□□□□ 0.55
PCDH1-201ENST00000287008 HIC2Q96JB3 615 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 POLR1BQ9H9Y6 1135 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 MIOSQ9NXC5 875 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 SDK1Q7Z5N4 2213 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 IPO13O94829 963 aaKnown RBP18.45■□□□□ 0.54
PCDH1-201ENST00000287008 VNN1O95497 513 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 RFC2P35250 354 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 JAG1P78504 1218 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 EML3Q32P44 896 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 TTMPQ5BVD1 217 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 TSTD2Q5T7W7 516 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 LDB1Q86U70 411 aaPredicted RBP18.45■□□□□ 0.54
PCDH1-201ENST00000287008 SLC51AQ86UW1 340 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 ARMC8Q8IUR7 673 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 PCDH19Q8TAB3 1148 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 RORBQ92753 470 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 NTAN1Q96AB6 310 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 RAD51AP1Q96B01 352 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 ZNF607Q96SK3 696 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 A0A1W2PPM1 405 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 PTGES3LE9PB15 166 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 RFTN1Q14699 578 aaPredicted RBP18.45■□□□□ 0.54
PCDH1-201ENST00000287008 TIGD2Q4W5G0 525 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 EIF3MQ7L2H7 374 aaKnown RBP18.45■□□□□ 0.54
PCDH1-201ENST00000287008 BNIPLQ7Z465 357 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 SERPINA9Q86WD7 417 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 PHF10Q8WUB8 498 aaKnown RBP18.45■□□□□ 0.54
PCDH1-201ENST00000287008 TRMT61BQ9BVS5 477 aaKnown RBP18.45■□□□□ 0.54
PCDH1-201ENST00000287008 RPRD1BQ9NQG5 326 aaKnown RBP18.45■□□□□ 0.54
PCDH1-201ENST00000287008 CORO1CQ9ULV4 474 aaPredicted RBP18.45■□□□□ 0.54
PCDH1-201ENST00000287008 FZD10Q9ULW2 581 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 MAGEA10P43363 369 aaPredicted RBP18.45■□□□□ 0.54
PCDH1-201ENST00000287008 FSTL1Q12841 308 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 SLC30A9Q6PML9 568 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 CCL22O00626 93 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 SCN2BO60939 215 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 ATXN7L2Q5T6C5 722 aaPredicted RBP18.45■□□□□ 0.54
PCDH1-201ENST00000287008 TXNDC8Q6A555 127 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 CHST15Q7LFX5 561 aaPredicted RBP18.45■□□□□ 0.54
PCDH1-201ENST00000287008 METTL21AQ8WXB1 218 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 MCMBPQ9BTE3 642 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 SLITRK2Q9H156 845 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 SEMA3GQ9NS98 782 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 GGA2Q9UJY4 613 aa18.45■□□□□ 0.54
PCDH1-201ENST00000287008 KRT33AO76009 404 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 CMPK1P30085 196 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 RPL4P36578 427 aaKnown RBP18.44■□□□□ 0.54
PCDH1-201ENST00000287008 SLC25A3Q00325 362 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 USP4Q13107 963 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 CPTPQ5TA50 214 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 HDDC3Q8N4P3 179 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 TSTD1Q8NFU3 115 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 BCAS3Q9H6U6 928 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 CD248Q9HCU0 757 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 SLCO1B3Q9NPD5 702 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 CCDC177Q9NQR7 707 aaPredicted RBP18.44■□□□□ 0.54
PCDH1-201ENST00000287008 COPG2Q9UBF2 871 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 MRTO4Q9UKD2 239 aaKnown RBP18.44■□□□□ 0.54
PCDH1-201ENST00000287008 LINC00854A0A1B0GVQ3 168 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 IQCF5A8MTL0 148 aa18.44■□□□□ 0.54
PCDH1-201ENST00000287008 MAP2K7O14733 419 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms