RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 EIF2S1P05198 315 aaKnown RBP10.36□□□□□ -0.75
SKA1-201ENST00000285116 HLA-DQB2P05538 268 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 ACVR1Q04771 509 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 TRIM32Q13049 653 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 LDLRAD1Q5T700 205 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 SLC2A7Q6PXP3 512 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 SPRED1Q7Z699 444 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 PAPD5Q8NDF8 572 aaKnown RBP10.36□□□□□ -0.75
SKA1-201ENST00000285116 IPMKQ8NFU5 416 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 STARD8Q92502 1023 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 CCDC97Q96F63 343 aaPredicted RBP10.36□□□□□ -0.75
SKA1-201ENST00000285116 CGREF1Q99674 301 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 TNFRSF12AQ9NP84 129 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 SLC2A6Q9UGQ3 507 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 RIMKLBQ9ULI2 386 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 MYO16Q9Y6X6 1858 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 TTC24A2A3L6 582 aaPredicted RBP10.35□□□□□ -0.75
SKA1-201ENST00000285116 MYBPHLA2RUH7 354 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 AQP9O43315 295 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 VPS4BO75351 444 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 CLPXO76031 633 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 OXSR1O95747 527 aaPredicted RBP10.35□□□□□ -0.75
SKA1-201ENST00000285116 MT-CYBP00156 380 aaPredicted RBP10.35□□□□□ -0.75
SKA1-201ENST00000285116 FCGR1AP12314 374 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 KCNA5P22460 613 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 GRIA3P42263 894 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 HERVK_113P63132 956 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 GNA12Q03113 381 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 OXA1LQ15070 435 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 TAF1CQ15572 869 aaPredicted RBP10.35□□□□□ -0.75
SKA1-201ENST00000285116 TBCELQ5QJ74 424 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 GALNT18Q6P9A2 607 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 CILP2Q8IUL8 1156 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 FUNDC1Q8IVP5 155 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 ZC3H7AQ8IWR0 971 aaKnown RBP10.35□□□□□ -0.75
SKA1-201ENST00000285116 OR13F1Q8NGS4 319 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 GPR150Q8NGU9 434 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 EFHD2Q96C19 240 aaPredicted RBP10.35□□□□□ -0.75
SKA1-201ENST00000285116 IMP4Q96G21 291 aaKnown RBP10.35□□□□□ -0.75
SKA1-201ENST00000285116 ERVK-6Q9BXR3 956 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 SNX10Q9Y5X0 201 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 TRPM7Q96QT4 1865 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 C1orf232A0A0U1RR37 186 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 RNF103-CHMP3A0A140T963 221 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 CPNE6O95741 557 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 PEX11BO96011 259 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 GPIP06744 558 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 HNRNPLP14866 589 aaKnown RBP eCLIP10.35□□□□□ -0.75
SKA1-201ENST00000285116 SAT1P21673 171 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 CSHL1Q14406 222 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 MFSD10Q14728 455 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 ATP6AP1Q15904 470 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 FXNQ16595 210 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 RBM20Q5T481 1227 aaKnown RBP10.35□□□□□ -0.75
SKA1-201ENST00000285116 HECTD2Q5U5R9 776 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 ARHGAP36Q6ZRI8 547 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 SAPCD2Q86UD0 394 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 IGFN1Q86VF2 1251 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 EPHX4Q8IUS5 362 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 CLYBLQ8N0X4 340 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 RTL3Q8N8U3 475 aaKnown RBP10.35□□□□□ -0.75
SKA1-201ENST00000285116 ZNF784Q8NCA9 323 aaPredicted RBP10.35□□□□□ -0.75
SKA1-201ENST00000285116 RHEBL1Q8TAI7 183 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 CYGBQ8WWM9 190 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 C19orf60Q96EN9 201 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 CELF6Q96J87 481 aaKnown RBP10.35□□□□□ -0.75
SKA1-201ENST00000285116 C1orf74Q96LT6 269 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 ACBD6Q9BR61 282 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 TINF2Q9BSI4 451 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 MROQ9BYG7 248 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 SLC39A8Q9C0K1 460 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 PKD2L2Q9NZM6 624 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 ACTR3BQ9P1U1 418 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 MYO7AQ13402 2215 aa10.35□□□□□ -0.75
SKA1-201ENST00000285116 GRXCR2A6NFK2 248 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 UBFD1O14562 309 aaKnown RBP10.34□□□□□ -0.75
SKA1-201ENST00000285116 GPC4O75487 556 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 IL10P22301 178 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 HLCSP50747 726 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 STX1BP61266 288 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 TUBA3CQ13748 450 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 INPP5AQ14642 412 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 NEDD8Q15843 81 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 KANK2Q63ZY3 851 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 PTRH1Q86Y79 214 aaKnown RBP10.34□□□□□ -0.75
SKA1-201ENST00000285116 PHYKPLQ8IUZ5 450 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 MINDY2Q8NBR6 621 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 MS4A4AQ96JQ5 239 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 PSD2Q9BQI7 771 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 FSD1LQ9BXM9 530 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 SLC52A3Q9NQ40 469 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 DAPK2Q9UIK4 370 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 VWA7Q9Y334 891 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 CPQQ9Y646 472 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 DNAH14Q0VDD8 3507 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 TRIP12Q14669 1992 aaPredicted RBP10.34□□□□□ -0.75
SKA1-201ENST00000285116 DFFAO00273 331 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 KDM1AO60341 852 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 ELNP15502 786 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 JUNBP17275 347 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms