RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 DNAJB7Q7Z6W7 309 aaPredicted RBP18.28■□□□□ 0.52
PDLIM3-201ENST00000284767 LRTOMTQ8WZ04 291 aa18.28■□□□□ 0.52
PDLIM3-201ENST00000284767 RMND5BQ96G75 393 aaPredicted RBP18.28■□□□□ 0.52
PDLIM3-201ENST00000284767 FAR2Q96K12 515 aa18.28■□□□□ 0.52
PDLIM3-201ENST00000284767 EXOC2Q96KP1 924 aa18.28■□□□□ 0.52
PDLIM3-201ENST00000284767 SEMA3CQ99985 751 aa18.28■□□□□ 0.52
PDLIM3-201ENST00000284767 EFHD1Q9BUP0 239 aa18.28■□□□□ 0.52
PDLIM3-201ENST00000284767 SEMA6AQ9H2E6 1030 aa18.28■□□□□ 0.52
PDLIM3-201ENST00000284767 TRPC7Q9HCX4 862 aa18.28■□□□□ 0.52
PDLIM3-201ENST00000284767 ZNF334Q9HCZ1 680 aaPredicted RBP18.28■□□□□ 0.52
PDLIM3-201ENST00000284767 hCG_2014768A0A024R1R8 64 aa18.27■□□□□ 0.52
PDLIM3-201ENST00000284767 A0A1B0GTW7 788 aa18.27■□□□□ 0.52
PDLIM3-201ENST00000284767 TCRBV3S1A0A5B6 114 aa18.27■□□□□ 0.52
PDLIM3-201ENST00000284767 E7ENX8 843 aa18.27■□□□□ 0.52
PDLIM3-201ENST00000284767 H3BNC9 293 aa18.27■□□□□ 0.52
PDLIM3-201ENST00000284767 TIMP1P01033 207 aa18.27■□□□□ 0.52
PDLIM3-201ENST00000284767 HOXD9P28356 352 aaPredicted RBP18.27■□□□□ 0.52
PDLIM3-201ENST00000284767 ZXDBP98169 803 aa18.27■□□□□ 0.52
PDLIM3-201ENST00000284767 IL10RBQ08334 325 aa18.27■□□□□ 0.52
PDLIM3-201ENST00000284767 PDAP1Q13442 181 aaKnown RBP18.27■□□□□ 0.52
PDLIM3-201ENST00000284767 ZNF460Q14592 562 aa18.27■□□□□ 0.52
PDLIM3-201ENST00000284767 PARP15Q460N3 678 aa18.27■□□□□ 0.52
PDLIM3-201ENST00000284767 IL31Q6EBC2 164 aa18.27■□□□□ 0.52
PDLIM3-201ENST00000284767 LPCAT2Q7L5N7 544 aa18.27■□□□□ 0.52
PDLIM3-201ENST00000284767 TEX26Q8N6G2 289 aa18.27■□□□□ 0.52
PDLIM3-201ENST00000284767 BHMTQ93088 406 aa18.27■□□□□ 0.52
PDLIM3-201ENST00000284767 YME1L1Q96TA2 773 aa18.27■□□□□ 0.52
PDLIM3-201ENST00000284767 TMEM79Q9BSE2 394 aa18.27■□□□□ 0.52
PDLIM3-201ENST00000284767 C11orf49Q9H6J7 331 aa18.27■□□□□ 0.52
PDLIM3-201ENST00000284767 RHBDL2Q9NX52 303 aa18.27■□□□□ 0.52
PDLIM3-201ENST00000284767 SPG21Q9NZD8 308 aa18.27■□□□□ 0.52
PDLIM3-201ENST00000284767 AGO1Q9UL18 857 aaKnown RBP18.27■□□□□ 0.52
PDLIM3-201ENST00000284767 TEX28O15482 410 aa18.27■□□□□ 0.51
PDLIM3-201ENST00000284767 PRAMEF11O60813 436 aa18.27■□□□□ 0.51
PDLIM3-201ENST00000284767 SLC11A2P49281 568 aa18.27■□□□□ 0.51
PDLIM3-201ENST00000284767 KPNA1P52294 538 aaPredicted RBP18.27■□□□□ 0.51
PDLIM3-201ENST00000284767 RAB10P61026 200 aa18.27■□□□□ 0.51
PDLIM3-201ENST00000284767 LRP8Q14114 963 aa18.27■□□□□ 0.51
PDLIM3-201ENST00000284767 SQLEQ14534 574 aa18.27■□□□□ 0.51
PDLIM3-201ENST00000284767 CROCCP3Q8IVE0 287 aa18.27■□□□□ 0.51
PDLIM3-201ENST00000284767 PCDH20Q8N6Y1 951 aaKnown RBP18.27■□□□□ 0.51
PDLIM3-201ENST00000284767 CCNYL1Q8N7R7 359 aa18.27■□□□□ 0.51
PDLIM3-201ENST00000284767 PDZD8Q8NEN9 1154 aa18.27■□□□□ 0.51
PDLIM3-201ENST00000284767 NSMCE3Q96MG7 304 aa18.27■□□□□ 0.51
PDLIM3-201ENST00000284767 GPR78Q96P69 363 aa18.27■□□□□ 0.51
PDLIM3-201ENST00000284767 ANKRD60Q9BZ19 345 aa18.27■□□□□ 0.51
PDLIM3-201ENST00000284767 UNKQ9C0B0 810 aaKnown RBP18.27■□□□□ 0.51
PDLIM3-201ENST00000284767 OLAHQ9NV23 265 aa18.27■□□□□ 0.51
PDLIM3-201ENST00000284767 CACNA2D2Q9NY47 1150 aa18.27■□□□□ 0.51
PDLIM3-201ENST00000284767 KCTD3Q9Y597 815 aa18.27■□□□□ 0.51
PDLIM3-201ENST00000284767 LTBP2Q14767 1821 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 BMP10O95393 424 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 PIRTP0C851 137 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 GJA8P48165 433 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 MAPKAPK2P49137 400 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 DNAJB13P59910 316 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 GNA12Q03113 381 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 POTEHQ6S545 545 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 SLC41A1Q8IVJ1 513 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 HERC6Q8IVU3 1022 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 MFSD6LQ8IWD5 586 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 CNTN4Q8IWV2 1026 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 KLHL23Q8NBE8 558 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 PBXIP1Q96AQ6 731 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 MYRFLQ96LU7 910 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 MRPL46Q9H2W6 279 aaKnown RBP18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 SPAG4Q9NPE6 437 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 RANBP2P49792 3224 aaKnown RBP18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 RGRP47804 291 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 GALK1P51570 392 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 KPNA2P52292 529 aaKnown RBP18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 PTPRCAPQ14761 206 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 TSTD2Q5T7W7 516 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 TPGS2Q68CL5 300 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 TXNDC8Q6A555 127 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 AFAP1L2Q8N4X5 818 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 LPGAT1Q92604 370 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 SLCO4A1Q96BD0 722 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 HERC2P3Q9BVR0 1158 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 PCDHAC1Q9H158 963 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 CAAP1Q9H8G2 361 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 CLK4Q9HAZ1 481 aaKnown RBP18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 PDFQ9HBH1 243 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 MRM3Q9HC36 420 aaKnown RBP18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 TREX1Q9NSU2 369 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 SLC8A2Q9UPR5 921 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 SNX13Q9Y5W8 968 aa18.26■□□□□ 0.51
PDLIM3-201ENST00000284767 ANAPC1Q9H1A4 1944 aa18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 TMEM233B4DJY2 109 aa18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 NRG2O14511 850 aaPredicted RBP18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 STMN1P16949 149 aa18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 SLC1A2P43004 574 aa18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 RAB33AQ14088 237 aa18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 ZNF235Q14590 738 aa18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 ZNF789Q5FWF6 425 aa18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 MTX3Q5HYI7 312 aa18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 SIRPB2Q5JXA9 342 aa18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 REP15Q6BDI9 236 aa18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 CDK5RAP1Q96SZ6 601 aaKnown RBP18.25■□□□□ 0.51
PDLIM3-201ENST00000284767 MRPL57Q9BQC6 102 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms