RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 STK38LQ9Y2H1 464 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 PCDHB9Q9Y5E1 797 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 GRXCR2A6NFK2 248 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 TRAFD1O14545 582 aaPredicted RBP20.9■□□□□ 0.94
YBX3-202ENST00000279550 CTPS1P17812 591 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 SP100P23497 879 aaPredicted RBP20.9■□□□□ 0.94
YBX3-202ENST00000279550 GKP32189 559 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 CTSOP43234 321 aaPredicted RBP20.9■□□□□ 0.94
YBX3-202ENST00000279550 PRKAA2P54646 552 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 AP1S1P61966 158 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 FAM83EQ2M2I3 478 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 ARL13AQ5H913 290 aaPredicted RBP20.9■□□□□ 0.94
YBX3-202ENST00000279550 MTSS1LQ765P7 747 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 KIAA0907Q7Z7F0 614 aaPredicted RBP20.9■□□□□ 0.94
YBX3-202ENST00000279550 SDCCAG8Q86SQ7 713 aaPredicted RBP20.9■□□□□ 0.94
YBX3-202ENST00000279550 AGR3Q8TD06 166 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 MAPK15Q8TD08 544 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 MYO19Q96H55 970 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 AARSD1Q9BTE6 412 aaKnown RBP20.9■□□□□ 0.94
YBX3-202ENST00000279550 CCDC106Q9BWC9 280 aa20.9■□□□□ 0.94
YBX3-202ENST00000279550 CXorf51AA0A1B0GTR3 108 aa20.89■□□□□ 0.93
YBX3-202ENST00000279550 TRIM24O15164 1050 aa20.89■□□□□ 0.93
YBX3-202ENST00000279550 ZNF821O75541 412 aaPredicted RBP20.89■□□□□ 0.93
YBX3-202ENST00000279550 PIGNO95427 931 aa20.89■□□□□ 0.93
YBX3-202ENST00000279550 KPNA2P52292 529 aaKnown RBP20.89■□□□□ 0.93
YBX3-202ENST00000279550 UBAP2LQ14157 1087 aaKnown RBP20.89■□□□□ 0.93
YBX3-202ENST00000279550 DMC1Q14565 340 aa20.89■□□□□ 0.93
YBX3-202ENST00000279550 AGAP9Q5VTM2 703 aa20.89■□□□□ 0.93
YBX3-202ENST00000279550 GPR153Q6NV75 609 aa20.89■□□□□ 0.93
YBX3-202ENST00000279550 C12orf40Q86WS4 652 aa20.89■□□□□ 0.93
YBX3-202ENST00000279550 PARP9Q8IXQ6 854 aa20.89■□□□□ 0.93
YBX3-202ENST00000279550 ETFBKMTQ8IXQ9 262 aa20.89■□□□□ 0.93
YBX3-202ENST00000279550 PIANPQ8IYJ0 282 aa20.89■□□□□ 0.93
YBX3-202ENST00000279550 PIH1D2Q8WWB5 315 aa20.89■□□□□ 0.93
YBX3-202ENST00000279550 SCG3Q8WXD2 468 aaKnown RBP20.89■□□□□ 0.93
YBX3-202ENST00000279550 LPGAT1Q92604 370 aa20.89■□□□□ 0.93
YBX3-202ENST00000279550 MIPEPQ99797 713 aa20.89■□□□□ 0.93
YBX3-202ENST00000279550 RPP25Q9BUL9 199 aaKnown RBP20.89■□□□□ 0.93
YBX3-202ENST00000279550 TBC1D10AQ9BXI6 508 aa20.89■□□□□ 0.93
YBX3-202ENST00000279550 TNKS2Q9H2K2 1166 aa20.89■□□□□ 0.93
YBX3-202ENST00000279550 FAM96AQ9H5X1 160 aa20.89■□□□□ 0.93
YBX3-202ENST00000279550 STN1Q9H668 368 aaKnown RBP20.89■□□□□ 0.93
YBX3-202ENST00000279550 CCDC22O60826 627 aa20.88■□□□□ 0.93
YBX3-202ENST00000279550 PGLSO95336 258 aa20.88■□□□□ 0.93
YBX3-202ENST00000279550 PTPN4P29074 926 aa20.88■□□□□ 0.93
YBX3-202ENST00000279550 PMLP29590 882 aa20.88■□□□□ 0.93
YBX3-202ENST00000279550 DGKGP49619 791 aa20.88■□□□□ 0.93
YBX3-202ENST00000279550 SKIV2LQ15477 1246 aaKnown RBP20.88■□□□□ 0.93
YBX3-202ENST00000279550 GAB4Q2WGN9 574 aa20.88■□□□□ 0.93
YBX3-202ENST00000279550 RALGPS1Q5JS13 557 aa20.88■□□□□ 0.93
YBX3-202ENST00000279550 RINLQ6ZS11 566 aa20.88■□□□□ 0.93
YBX3-202ENST00000279550 ADIPOR2Q86V24 386 aa20.88■□□□□ 0.93
YBX3-202ENST00000279550 AHI1Q8N157 1196 aa20.88■□□□□ 0.93
YBX3-202ENST00000279550 CCNYL1Q8N7R7 359 aa20.88■□□□□ 0.93
YBX3-202ENST00000279550 EID2BQ96D98 161 aa20.88■□□□□ 0.93
YBX3-202ENST00000279550 SHCBP1LQ9BZQ2 653 aa20.88■□□□□ 0.93
YBX3-202ENST00000279550 INTS10Q9NVR2 710 aaKnown RBP20.88■□□□□ 0.93
YBX3-202ENST00000279550 CORO1CQ9ULV4 474 aaPredicted RBP20.88■□□□□ 0.93
YBX3-202ENST00000279550 RAP2CQ9Y3L5 183 aa20.88■□□□□ 0.93
YBX3-202ENST00000279550 ZNF711Q9Y462 761 aa20.88■□□□□ 0.93
YBX3-202ENST00000279550 BRWD1Q9NSI6 2320 aa20.88■□□□□ 0.93
YBX3-202ENST00000279550 ATP5BP06576 529 aaKnown RBP20.87■□□□□ 0.93
YBX3-202ENST00000279550 SERPINA6P08185 405 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 ALPIP09923 528 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 TFEBP19484 476 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 ATP5F1P24539 256 aaPredicted RBP20.87■□□□□ 0.93
YBX3-202ENST00000279550 MC4RP32245 332 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 KCNC1P48547 511 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 STK19P49842 368 aaPredicted RBP20.87■□□□□ 0.93
YBX3-202ENST00000279550 SUOXP51687 545 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 SLC20A2Q08357 652 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 SMAD4Q13485 552 aaKnown RBP20.87■□□□□ 0.93
YBX3-202ENST00000279550 PEX6Q13608 980 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 RUNX3Q13761 415 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 SLC9B1Q4ZJI4 515 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 DGKKQ5KSL6 1271 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 PSAPL1Q6NUJ1 521 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 LONP2Q86WA8 852 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 CPA6Q8N4T0 437 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 FAM136AQ96C01 138 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 TUBB6Q9BUF5 446 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 TRMT61BQ9BVS5 477 aaKnown RBP20.87■□□□□ 0.93
YBX3-202ENST00000279550 COG4Q9H9E3 785 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 CYP4F12Q9HCS2 524 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 MED16Q9Y2X0 877 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 UBA6A0AVT1 1052 aaPredicted RBP20.87■□□□□ 0.93
YBX3-202ENST00000279550 A8MT66 165 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 STX7O15400 261 aaKnown RBP20.87■□□□□ 0.93
YBX3-202ENST00000279550 DIAPH2O60879 1101 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 TULP3O75386 442 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 ENO1P06733 434 aaKnown RBP20.87■□□□□ 0.93
YBX3-202ENST00000279550 CISD3P0C7P0 127 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 GDI1P31150 447 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 FMO4P31512 558 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 EPHB1P54762 984 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 DNAJB13P59910 316 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 SULT2A1Q06520 285 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 HTR4Q13639 388 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 GEN1Q17RS7 908 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 SETMARQ53H47 684 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms