RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 SCG3Q8WXD2 468 aaKnown RBP6.5□□□□□ -1.37
CD44-204ENST00000279452 OR1E3Q8WZA6 343 aa6.5□□□□□ -1.37
CD44-204ENST00000279452 ZNF592Q92610 1267 aa6.5□□□□□ -1.37
CD44-204ENST00000279452 C16orf45Q96MC5 204 aaPredicted RBP6.5□□□□□ -1.37
CD44-204ENST00000279452 TTC25Q96NG3 672 aa6.5□□□□□ -1.37
CD44-204ENST00000279452 CDC6Q99741 560 aa6.5□□□□□ -1.37
CD44-204ENST00000279452 ZSCAN5AQ9BUG6 496 aa6.5□□□□□ -1.37
CD44-204ENST00000279452 LRRC61Q9BV99 259 aa6.5□□□□□ -1.37
CD44-204ENST00000279452 SYNDIG1Q9H7V2 258 aa6.5□□□□□ -1.37
CD44-204ENST00000279452 ETNK1Q9HBU6 452 aa6.5□□□□□ -1.37
CD44-204ENST00000279452 GPR27Q9NS67 375 aa6.5□□□□□ -1.37
CD44-204ENST00000279452 EVA1BQ9NVM1 165 aa6.5□□□□□ -1.37
CD44-204ENST00000279452 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.5□□□□□ -1.37
CD44-204ENST00000279452 SIRPGQ9P1W8 387 aa6.5□□□□□ -1.37
CD44-204ENST00000279452 GULP1Q9UBP9 304 aa6.5□□□□□ -1.37
CD44-204ENST00000279452 KLF15Q9UIH9 416 aa6.5□□□□□ -1.37
CD44-204ENST00000279452 PCOLCE2Q9UKZ9 415 aa6.5□□□□□ -1.37
CD44-204ENST00000279452 TMEM98Q9Y2Y6 226 aa6.5□□□□□ -1.37
CD44-204ENST00000279452 ARL5AQ9Y689 179 aa6.5□□□□□ -1.37
CD44-204ENST00000279452 NUMA1Q14980 2115 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 NUP205Q92621 2012 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 CACNA1HO95180 2353 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 RGSL1A5PLK6 1076 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 ERI2A8K979 691 aaKnown RBP6.49□□□□□ -1.37
CD44-204ENST00000279452 B4DGG1 531 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 CCL22O00626 93 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 CES2O00748 559 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 SIGLEC6O43699 453 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 MTX2O75431 263 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 PRAMEF1O95521 474 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 CELA2BP08218 269 aaPredicted RBP6.49□□□□□ -1.37
CD44-204ENST00000279452 MYF5P13349 255 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 LPOP22079 712 aaPredicted RBP6.49□□□□□ -1.37
CD44-204ENST00000279452 ADRA1AP35348 466 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 HMGCLP35914 325 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 COILP38432 576 aaPredicted RBP6.49□□□□□ -1.37
CD44-204ENST00000279452 RXRGP48443 463 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 SESN2P58004 480 aaPredicted RBP6.49□□□□□ -1.37
CD44-204ENST00000279452 PDE1BQ01064 536 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 DPTQ07507 201 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 CDH17Q12864 832 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 ILF3Q12906 894 aaKnown RBP eCLIP6.49□□□□□ -1.37
CD44-204ENST00000279452 DNAJC3Q13217 504 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 SEMA5AQ13591 1074 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 TAF1AQ15573 450 aaPredicted RBP6.49□□□□□ -1.37
CD44-204ENST00000279452 CHRNA6Q15825 494 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 CDKN3Q16667 212 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 PLA2G4EQ3MJ16 856 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 CCDC38Q502W7 563 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 ZNF648Q5T619 568 aaPredicted RBP6.49□□□□□ -1.37
CD44-204ENST00000279452 HENMT1Q5T8I9 393 aaKnown RBP6.49□□□□□ -1.37
CD44-204ENST00000279452 ZDHHC20Q5W0Z9 365 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 KCTD16Q68DU8 428 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 TTC27Q6P3X3 843 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 DRICH1Q6PGQ1 229 aaPredicted RBP6.49□□□□□ -1.37
CD44-204ENST00000279452 SLC30A9Q6PML9 568 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 CRTC3Q6UUV7 619 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 C4orf22Q6V702 233 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 RANBP10Q6VN20 620 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 CHST15Q7LFX5 561 aaPredicted RBP6.49□□□□□ -1.37
CD44-204ENST00000279452 PIP4P1Q86T03 277 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 GKN2Q86XP6 184 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 GALNT13Q8IUC8 556 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 SLC25A45Q8N413 288 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 FSTL5Q8N475 847 aaPredicted RBP6.49□□□□□ -1.37
CD44-204ENST00000279452 TTC30BQ8N4P2 665 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 TRAM1L1Q8N609 369 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 PPHLN1Q8NEY8 458 aaKnown RBP6.49□□□□□ -1.37
CD44-204ENST00000279452 OR4K2Q8NGD2 314 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 OR13C4Q8NGS5 318 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 ACTRT1Q8TDG2 376 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 GLMNQ92990 594 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 EID2BQ96D98 161 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 RTP4Q96DX8 246 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 PLEKHG4BQ96PX9 1271 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 DUSP23Q9BVJ7 150 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 TEX101Q9BY14 249 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 ZMYND15Q9H091 742 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 DDX47Q9H0S4 455 aaKnown RBP6.49□□□□□ -1.37
CD44-204ENST00000279452 CDH19Q9H159 772 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 OR2AG1Q9H205 316 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 DPEP2Q9H4A9 486 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 NLGN3Q9NZ94 848 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 ASIC3Q9UHC3 531 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 ZNHIT2Q9UHR6 403 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 FEZ2Q9UHY8 353 aaPredicted RBP6.49□□□□□ -1.37
CD44-204ENST00000279452 FKBPLQ9UIM3 349 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 CRLS1Q9UJA2 301 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 SUFUQ9UMX1 484 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 APOBEC2Q9Y235 224 aaKnown RBP6.49□□□□□ -1.37
CD44-204ENST00000279452 DRG1Q9Y295 367 aaKnown RBP6.49□□□□□ -1.37
CD44-204ENST00000279452 PRKAB1Q9Y478 270 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 KCTD3Q9Y597 815 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 SLC30A1Q9Y6M5 507 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 USP34Q70CQ2 3546 aa6.49□□□□□ -1.37
CD44-204ENST00000279452 ANKRD36A6QL64 1941 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 ADAMTS9Q9P2N4 1935 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 HEATR9A2RTY3 570 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 CPED1A4D0V7 1026 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 GOLGA8MH3BSY2 632 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms