RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 CHERPQ8IWX8 916 aaKnown RBP12.89□□□□□ -0.35
C9orf3-201ENST00000277198 PCDH20Q8N6Y1 951 aaKnown RBP12.89□□□□□ -0.35
C9orf3-201ENST00000277198 VN1R2Q8NFZ6 395 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 GPR150Q8NGU9 434 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 RHEBL1Q8TAI7 183 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 LPGAT1Q92604 370 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 ATP6V1E2Q96A05 226 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 ZUFSPQ96AP4 578 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 TCF25Q9BQ70 676 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 MRPL9Q9BYD2 267 aaKnown RBP12.89□□□□□ -0.35
C9orf3-201ENST00000277198 ZYG11BQ9C0D3 744 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 ATXN3LQ9H3M9 355 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 NOL6Q9H6R4 1146 aaKnown RBP12.89□□□□□ -0.35
C9orf3-201ENST00000277198 CYP4F12Q9HCS2 524 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 ARMC1Q9NVT9 282 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 CLDND1Q9NY35 253 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 SPG21Q9NZD8 308 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 CCDC167Q9P0B6 97 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 NUP205Q92621 2012 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 LOC285095A0A1B0GVY8 99 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 DYTNA2CJ06 578 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 KLHL33A6NCF5 533 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 PRORSD1PA6NEY8 169 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 MSI1O43347 362 aaKnown RBP12.89□□□□□ -0.35
C9orf3-201ENST00000277198 SRP72O76094 671 aaKnown RBP12.89□□□□□ -0.35
C9orf3-201ENST00000277198 EPOP01588 193 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 GRIK1P39086 918 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 SUOXP51687 545 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 PRAMEP78395 509 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 CDKL1Q00532 357 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 COL19A1Q14993 1142 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 NADK2Q4G0N4 442 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 COQ5Q5HYK3 327 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 RNF135Q8IUD6 432 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 ZNF683Q8IZ20 524 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 PACRGLQ8N7B6 248 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 C19orf60Q96EN9 201 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 HIC2Q96JB3 615 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 TRIM15Q9C019 465 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 C8orf4Q9NR00 106 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 SCML2Q9UQR0 700 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 PRG3Q9Y2Y8 225 aaPredicted RBP12.89□□□□□ -0.35
C9orf3-201ENST00000277198 NDUFAF1Q9Y375 327 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 BDP1A6H8Y1 2624 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 IGLV3-10A0A075B6K4 115 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 INPPL1O15357 1258 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 GLP2RO95838 553 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 BMP2P12643 396 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 TCN1P20061 433 aaPredicted RBP12.88□□□□□ -0.35
C9orf3-201ENST00000277198 BRCC3P46736 316 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 ALDH7A1P49419 539 aaKnown RBP12.88□□□□□ -0.35
C9orf3-201ENST00000277198 MTA1Q13330 715 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 PCSK7Q16549 785 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 UGT3A2Q3SY77 523 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.88□□□□□ -0.35
C9orf3-201ENST00000277198 ZNF789Q5FWF6 425 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 C6orf52Q5T4I8 152 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 RBM44Q6ZP01 1051 aaKnown RBP12.88□□□□□ -0.35
C9orf3-201ENST00000277198 RAB44Q7Z6P3 723 aaPredicted RBP12.88□□□□□ -0.35
C9orf3-201ENST00000277198 C14orf80Q86SX3 495 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 DHFR2Q86XF0 187 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 GALNT4Q8N4A0 578 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 ANKFN1Q8N957 763 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 ADAMTS19Q8TE59 1207 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 TSPEARQ8WU66 669 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 ANKRD49Q8WVL7 239 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 PHF21BQ96EK2 531 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 FUBP3Q96I24 572 aaKnown RBP eCLIP12.88□□□□□ -0.35
C9orf3-201ENST00000277198 PRPF18Q99633 342 aaKnown RBP12.88□□□□□ -0.35
C9orf3-201ENST00000277198 FBXO44Q9H4M3 255 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 MARCH5Q9NX47 278 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 MPP6Q9NZW5 540 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 NCOR1O75376 2440 aa12.88□□□□□ -0.35
C9orf3-201ENST00000277198 SHROOM3Q8TF72 1996 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 AQP12BA6NM10 295 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 UBFD1O14562 309 aaKnown RBP12.87□□□□□ -0.35
C9orf3-201ENST00000277198 VPS4BO75351 444 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 SUPT7LO94864 414 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 MMP2P08253 660 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 FDXRP22570 491 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 CD86P42081 329 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 TUBA4AP68366 448 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 YWHAHQ04917 246 aaPredicted RBP12.87□□□□□ -0.35
C9orf3-201ENST00000277198 IL10RBQ08334 325 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 GRIK2Q13002 908 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 PPP1R3AQ16821 1122 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 MAP7D1Q3KQU3 841 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 UNC50Q53HI1 259 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 PIK3R6Q5UE93 754 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 MRNIPQ6NTE8 343 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 KLHDC10Q6PID8 442 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 CYHR1Q6ZMK1 362 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 CARM1Q86X55 608 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 AQP12AQ8IXF9 295 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 COLGALT2Q8IYK4 626 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 METTL25Q8N6Q8 603 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 FAM156AQ8NDB6 213 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 TRPC4APQ8TEL6 797 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.87□□□□□ -0.359e-7■■■■■ 66.7
C9orf3-201ENST00000277198 IGSF21Q96ID5 467 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms