RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 PYGLP06737 847 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 MYOGP15173 224 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 SERPINA4P29622 427 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 ADARP55265 1226 aaKnown RBP9.54□□□□□ -0.88
TRIM55-201ENST00000276573 C1QTNF8P60827 252 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 ATP6V0D1P61421 351 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 NFKB2Q00653 900 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 RAD51Q06609 339 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 ZNF77Q15935 545 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 UNC50Q53HI1 259 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 ZNF678Q5SXM1 525 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 CERS6Q6ZMG9 384 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 ACAD11Q709F0 780 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 RPS27LQ71UM5 84 aaKnown RBP9.54□□□□□ -0.88
TRIM55-201ENST00000276573 GRASPQ7Z6J2 395 aaPredicted RBP9.54□□□□□ -0.88
TRIM55-201ENST00000276573 ADGRG2Q8IZP9 1017 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 NKAPQ8N5F7 415 aaKnown RBP9.54□□□□□ -0.88
TRIM55-201ENST00000276573 RBM15BQ8NDT2 890 aaKnown RBP9.54□□□□□ -0.88
TRIM55-201ENST00000276573 FBXO27Q8NI29 283 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 KIAA1191Q96A73 305 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 ATOH8Q96SQ7 321 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 BBS2Q9BXC9 721 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 OSBPL1AQ9BXW6 950 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 NUF2Q9BZD4 464 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 MTIF3Q9H2K0 278 aaKnown RBP9.54□□□□□ -0.88
TRIM55-201ENST00000276573 GSTO2Q9H4Y5 243 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 PPIL1Q9Y3C6 166 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 HCFC2Q9Y5Z7 792 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 COMMD10Q9Y6G5 202 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 DOCK6Q96HP0 2047 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 C1orf232A0A0U1RR37 186 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 E9PBE3 544 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 NEDD8-MDP1E9PL57 170 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 ZNF197O14709 1029 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 PER2O15055 1255 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 DCXO43602 365 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 KLHL41O60662 606 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 POP4O95707 220 aaKnown RBP9.54□□□□□ -0.88
TRIM55-201ENST00000276573 PABPC1P11940 636 aaKnown RBP9.54□□□□□ -0.88
TRIM55-201ENST00000276573 BMP1P13497 986 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 MTHFD2P13995 350 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 TCF3P15923 654 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 CCND1P24385 295 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 EPHA3P29320 983 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 PRDX6P30041 224 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 PGM1P36871 562 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 MNAT1P51948 309 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 SULT2A1Q06520 285 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 KLF10Q13118 480 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 DMC1Q14565 340 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 NAA25Q14CX7 972 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 ACCSLQ4AC99 568 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 CARD16Q5EG05 197 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 CTSL3PQ5NE16 218 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 SH2D4BQ5SQS7 431 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 LY6G5CQ5SRR4 150 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 ZNF697Q5TEC3 545 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 FRMD7Q6ZUT3 714 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 KIAA0907Q7Z7F0 614 aaPredicted RBP9.54□□□□□ -0.88
TRIM55-201ENST00000276573 ZSWIM9Q86XI8 627 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 SUGP1Q8IWZ8 645 aaKnown RBP9.54□□□□□ -0.88
TRIM55-201ENST00000276573 STK40Q8N2I9 435 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 PHTF2Q8N3S3 785 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 PAF1Q8N7H5 531 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 ZNF557Q8N988 423 aaPredicted RBP9.54□□□□□ -0.88
TRIM55-201ENST00000276573 STAG3L4Q8TBR4 150 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 AGAP11Q8TF27 550 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 MCUR1Q96AQ8 359 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 CMTM5Q96DZ9 223 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 FAR2Q96K12 515 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 TUBGCP5Q96RT8 1024 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 SLC30A3Q99726 388 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 TRMOQ9BU70 441 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 CPEB1Q9BZB8 566 aaKnown RBP9.54□□□□□ -0.88
TRIM55-201ENST00000276573 P2RY12Q9H244 342 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 MMADHCQ9H3L0 296 aaPredicted RBP9.54□□□□□ -0.88
TRIM55-201ENST00000276573 SUV39H2Q9H5I1 410 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 DENND2DQ9H6A0 471 aaPredicted RBP9.54□□□□□ -0.88
TRIM55-201ENST00000276573 GTSE1Q9NYZ3 720 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 SLCO3A1Q9UIG8 710 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 ZMYM5Q9UJ78 669 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 SLC25A13Q9UJS0 675 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 PLA2G4CQ9UP65 541 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 CDYLQ9Y232 598 aa9.54□□□□□ -0.88
TRIM55-201ENST00000276573 BPTFQ12830 3046 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 HELZP42694 1942 aaKnown RBP9.53□□□□□ -0.88
TRIM55-201ENST00000276573 ALPK3Q96L96 1907 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 TRPC5OSA6NMA1 111 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 TMEM233B4DJY2 109 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 UBXN8O00124 270 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 NEMP1O14524 444 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 GAPDHSO14556 408 aaPredicted RBP9.53□□□□□ -0.88
TRIM55-201ENST00000276573 MAGEC1O60732 1142 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 NIPSNAP2O75323 286 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 SUPT7LO94864 414 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 ESR1P03372 595 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 JUNP05412 331 aaKnown RBP9.53□□□□□ -0.88
TRIM55-201ENST00000276573 TYRP14679 529 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 CHRM3P20309 590 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 CPOXP36551 454 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms