RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 NAT6Q93015 286 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 RBM41Q96IZ5 413 aaKnown RBP14.36□□□□□ -0.11
HMGN3-201ENST00000275036 HIC2Q96JB3 615 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 TEKT5Q96M29 485 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 POLR1BQ9H9Y6 1135 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 SPATS2LQ9NUQ6 558 aaKnown RBP14.36□□□□□ -0.11
HMGN3-201ENST00000275036 DNPEPQ9ULA0 475 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 SLC17A4Q9Y2C5 497 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 TMEM98Q9Y2Y6 226 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 PLEKHM1Q9Y4G2 1056 aa14.36□□□□□ -0.11
HMGN3-201ENST00000275036 MGAQ8IWI9 3026 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 GRID2IPA4D2P6 1211 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 TCEA3O75764 348 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 DXOO77932 396 aaKnown RBP14.35□□□□□ -0.11
HMGN3-201ENST00000275036 AK4P27144 223 aaPredicted RBP14.35□□□□□ -0.11
HMGN3-201ENST00000275036 CDC25BP30305 580 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 ABCG1P45844 678 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 GNPDA1P46926 289 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 LSSP48449 732 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 SPINT3P49223 89 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 CCL7P80098 99 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 SLC14A2Q15849 920 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 SOWAHCQ53LP3 525 aaPredicted RBP14.35□□□□□ -0.11
HMGN3-201ENST00000275036 HENMT1Q5T8I9 393 aaKnown RBP14.35□□□□□ -0.11
HMGN3-201ENST00000275036 AADACL2Q6P093 401 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 BBS12Q6ZW61 710 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 BZW1Q7L1Q6 419 aaKnown RBP14.35□□□□□ -0.11
HMGN3-201ENST00000275036 NRSN1Q8IZ57 195 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 GPBAR1Q8TDU6 330 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 ALG3Q92685 438 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 SCARF2Q96GP6 870 aaPredicted RBP14.35□□□□□ -0.11
HMGN3-201ENST00000275036 COX14Q96I36 57 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 QKIQ96PU8 341 aaKnown RBP eCLIP14.35□□□□□ -0.11
HMGN3-201ENST00000275036 DESI2Q9BSY9 194 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 ADGRE3Q9BY15 652 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 SYNDIG1Q9H7V2 258 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 C10orf88Q9H8K7 445 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 UBP1Q9NZI7 540 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 TRIM10Q9UDY6 481 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 CNOT6Q9ULM6 557 aaKnown RBP14.35□□□□□ -0.11
HMGN3-201ENST00000275036 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.35□□□□□ -0.11
HMGN3-201ENST00000275036 PCDHA3Q9Y5H8 950 aa14.35□□□□□ -0.11
HMGN3-201ENST00000275036 PCYT1BQ9Y5K3 369 aaPredicted RBP14.35□□□□□ -0.11
HMGN3-201ENST00000275036 FADS2P1A8MWK0 482 aa14.34□□□□□ -0.11
HMGN3-201ENST00000275036 B4DGG1 531 aa14.34□□□□□ -0.11
HMGN3-201ENST00000275036 F5H423 210 aaPredicted RBP14.34□□□□□ -0.11
HMGN3-201ENST00000275036 INPP4BO15327 924 aa14.34□□□□□ -0.11
HMGN3-201ENST00000275036 PMPCBO75439 489 aa14.34□□□□□ -0.11
HMGN3-201ENST00000275036 IPO7O95373 1038 aaKnown RBP14.34□□□□□ -0.11
HMGN3-201ENST00000275036 RPLP0P05388 317 aaKnown RBP14.34□□□□□ -0.11
HMGN3-201ENST00000275036 IVLP07476 585 aa14.34□□□□□ -0.11
HMGN3-201ENST00000275036 NFKB1P19838 968 aa14.34□□□□□ -0.11
HMGN3-201ENST00000275036 CTNNA2P26232 953 aa14.34□□□□□ -0.11
HMGN3-201ENST00000275036 ACTN2P35609 894 aa14.34□□□□□ -0.11
HMGN3-201ENST00000275036 NAP1L1P55209 391 aaKnown RBP14.34□□□□□ -0.11
HMGN3-201ENST00000275036 CDK18Q07002 472 aa14.34□□□□□ -0.11
HMGN3-201ENST00000275036 CCDC173Q0VFZ6 552 aa14.34□□□□□ -0.11
HMGN3-201ENST00000275036 HLTFQ14527 1009 aaKnown RBP eCLIP14.34□□□□□ -0.11
HMGN3-201ENST00000275036 NOMO1Q15155 1222 aa14.34□□□□□ -0.11
HMGN3-201ENST00000275036 CERCAMQ5T4B2 595 aa14.34□□□□□ -0.11
HMGN3-201ENST00000275036 KDELC1Q6UW63 502 aa14.34□□□□□ -0.11
HMGN3-201ENST00000275036 TMPRSS9Q7Z410 1059 aa14.34□□□□□ -0.11
HMGN3-201ENST00000275036 RAVER1Q8IY67 606 aaKnown RBP14.34□□□□□ -0.11
HMGN3-201ENST00000275036 ZNF567Q8N184 647 aa14.34□□□□□ -0.11
HMGN3-201ENST00000275036 KIAA1524Q8TCG1 905 aa14.34□□□□□ -0.11
HMGN3-201ENST00000275036 TRNAU1APQ9NX07 287 aaKnown RBP14.34□□□□□ -0.11
HMGN3-201ENST00000275036 SHOC2Q9UQ13 582 aa14.34□□□□□ -0.11
HMGN3-201ENST00000275036 SPO11Q9Y5K1 396 aa14.34□□□□□ -0.11
HMGN3-201ENST00000275036 OAS3Q9Y6K5 1087 aaKnown RBP14.34□□□□□ -0.11
HMGN3-201ENST00000275036 RNF215Q9Y6U7 377 aa14.34□□□□□ -0.11
HMGN3-201ENST00000275036 D6RAR5 112 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 APOC4-APOC2K7ER74 178 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 AURKAO14965 403 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 APOC2P02655 101 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 ATP1A1P05023 1023 aaKnown RBP14.33□□□□□ -0.12
HMGN3-201ENST00000275036 FGF1P05230 155 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 ADCY8P40145 1251 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 MAZP56270 477 aaKnown RBP14.33□□□□□ -0.12
HMGN3-201ENST00000275036 COPS2P61201 443 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 CTBSQ01459 385 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 TLE3Q04726 772 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 SPIDRQ14159 915 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 C14orf28Q4W4Y0 310 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 MARK2Q7KZI7 788 aaKnown RBP14.33□□□□□ -0.12
HMGN3-201ENST00000275036 TMC3Q7Z5M5 1100 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 KIAA1328Q86T90 577 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 SPACA3Q8IXA5 215 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 GPR26Q8NDV2 337 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 PATE1Q8WXA2 126 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 HTR3CQ8WXA8 447 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 OXNAD1Q96HP4 312 aaPredicted RBP14.33□□□□□ -0.12
HMGN3-201ENST00000275036 NAF1Q96HR8 494 aaKnown RBP14.33□□□□□ -0.12
HMGN3-201ENST00000275036 CALR3Q96L12 384 aaKnown RBP14.33□□□□□ -0.12
HMGN3-201ENST00000275036 ZNF578Q96N58 590 aaPredicted RBP14.33□□□□□ -0.12
HMGN3-201ENST00000275036 FOXP3Q9BZS1 431 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 DPEP2Q9H4A9 486 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 FAM83DQ9H4H8 585 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 PRORYQ9H606 182 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 ZFYVE1Q9HBF4 777 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 PKD2L2Q9NZM6 624 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms