RNA–Protein interactions for RNA: ENST00000273077.8

PNKD-203, Transcript of PNKD, MBL domain containing, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PNKD, Length 3,021 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-203ENST00000273077 TRIM38O00635 465 aa13.9□□□□□ -0.18
PNKD-203ENST00000273077 KPNA6O60684 536 aa13.9□□□□□ -0.18
PNKD-203ENST00000273077 RHOBTB1O94844 696 aa13.9□□□□□ -0.18
PNKD-203ENST00000273077 SNRPB2P08579 225 aaKnown RBP13.9□□□□□ -0.18
PNKD-203ENST00000273077 SMIM18P0DKX4 95 aa13.9□□□□□ -0.18
PNKD-203ENST00000273077 GRIA3P42263 894 aa13.9□□□□□ -0.18
PNKD-203ENST00000273077 NDST2P52849 883 aa13.9□□□□□ -0.18
PNKD-203ENST00000273077 DIO3P55073 304 aa13.9□□□□□ -0.18
PNKD-203ENST00000273077 DNAJB13P59910 316 aa13.9□□□□□ -0.18
PNKD-203ENST00000273077 SMUG1Q53HV7 270 aa13.9□□□□□ -0.18
PNKD-203ENST00000273077 SETD3Q86TU7 594 aaPredicted RBP13.9□□□□□ -0.18
PNKD-203ENST00000273077 DENND1CQ8IV53 801 aa13.9□□□□□ -0.18
PNKD-203ENST00000273077 SCML4Q8N228 414 aa13.9□□□□□ -0.18
PNKD-203ENST00000273077 CDK15Q96Q40 435 aa13.9□□□□□ -0.18
PNKD-203ENST00000273077 SLC29A1Q99808 456 aa13.9□□□□□ -0.18
PNKD-203ENST00000273077 C1orf50Q9BV19 199 aa13.9□□□□□ -0.18
PNKD-203ENST00000273077 POLR1EQ9GZS1 481 aaKnown RBP13.9□□□□□ -0.18
PNKD-203ENST00000273077 COQ10BQ9H8M1 238 aa13.9□□□□□ -0.18
PNKD-203ENST00000273077 EML4Q9HC35 981 aaKnown RBP13.9□□□□□ -0.18
PNKD-203ENST00000273077 DDX18Q9NVP1 670 aaKnown RBP13.9□□□□□ -0.18
PNKD-203ENST00000273077 RNF186Q9NXI6 227 aa13.9□□□□□ -0.18
PNKD-203ENST00000273077 ASB1Q9Y576 335 aa13.9□□□□□ -0.18
PNKD-203ENST00000273077 C7orf72A4D263 438 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 NPEPPSL1A6NEC2 478 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 CBX4O00257 560 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 VNN2O95498 520 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 PSMC3P17980 439 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 IMPDH1P20839 514 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 EEF1DP29692 281 aaKnown RBP13.89□□□□□ -0.19
PNKD-203ENST00000273077 MYBPC1Q00872 1141 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 GSTM4Q03013 218 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 TRIM71Q2Q1W2 868 aaKnown RBP13.89□□□□□ -0.19
PNKD-203ENST00000273077 FUT11Q495W5 492 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 KIAA0408Q6ZU52 694 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 VPS33AQ96AX1 596 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 TSPAN17Q96FV3 270 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 ACOX2Q99424 681 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 CENPOQ9BU64 300 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 TUBB1Q9H4B7 451 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 FBXO44Q9H4M3 255 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 ARNT2Q9HBZ2 717 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 SMPD4Q9NXE4 827 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 ZFP37Q9Y6Q3 630 aaPredicted RBP13.89□□□□□ -0.19
PNKD-203ENST00000273077 SAC3D1A6NKF1 404 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 TMEM88BA6NKF7 163 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 SLC7A4O43246 635 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 OAZ2O95190 189 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 ZNF37AP17032 561 aaPredicted RBP13.89□□□□□ -0.19
PNKD-203ENST00000273077 DSC1Q08554 894 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 SQLEQ14534 574 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 UGT3A1Q6NUS8 523 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 SLC24A5Q71RS6 500 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 GET4Q7L5D6 327 aaPredicted RBP13.89□□□□□ -0.19
PNKD-203ENST00000273077 ABI1Q8IZP0 508 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 METTL25Q8N6Q8 603 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 LPCAT1Q8NF37 534 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 OR6K2Q8NGY2 324 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 TWIST2Q8WVJ9 160 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 SLCO4A1Q96BD0 722 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 C1orf74Q96LT6 269 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 CATSPERZQ9NTU4 200 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 ABT1Q9ULW3 272 aaKnown RBP13.89□□□□□ -0.19
PNKD-203ENST00000273077 USP22Q9UPT9 525 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 LZTS1Q9Y250 596 aa13.89□□□□□ -0.19
PNKD-203ENST00000273077 A0A0J9YYE9 177 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 PRSS51A0A1B0GVH4 220 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 MTMR11A4FU01 709 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 HTR3EA5X5Y0 456 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 EIF3FO00303 357 aaPredicted RBP13.88□□□□□ -0.19
PNKD-203ENST00000273077 NRP2O60462 931 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 NIPSNAP2O75323 286 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 MTHFD2P13995 350 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 CAPN3P20807 821 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 TACR2P21452 398 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 FCGRTP55899 365 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 TRIM25Q14258 630 aaKnown RBP13.88□□□□□ -0.19
PNKD-203ENST00000273077 NFE2Q16621 373 aaPredicted RBP13.88□□□□□ -0.19
PNKD-203ENST00000273077 C18orf21Q32NC0 220 aaPredicted RBP13.88□□□□□ -0.19
PNKD-203ENST00000273077 MAP3K21Q5TCX8 1036 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 HERC6Q8IVU3 1022 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 TMEM102Q8N9M5 508 aaPredicted RBP13.88□□□□□ -0.19
PNKD-203ENST00000273077 OR4L1Q8NH43 312 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 WBP2Q969T9 261 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 ZNF512Q96ME7 567 aaPredicted RBP13.88□□□□□ -0.19
PNKD-203ENST00000273077 UROC1Q96N76 676 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 PHF12Q96QT6 1004 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 GPR21Q99679 349 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 AP4S1Q9Y587 144 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 CLASP2O75122 1294 aaKnown RBP13.88□□□□□ -0.19
PNKD-203ENST00000273077 SRP72O76094 671 aaKnown RBP13.88□□□□□ -0.19
PNKD-203ENST00000273077 HGFP14210 728 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 ITGB6P18564 788 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 ATP6V1B2P21281 511 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 HERVK_113P63132 956 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 SEMG2Q02383 582 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 TRIP4Q15650 581 aaPredicted RBP13.88□□□□□ -0.19
PNKD-203ENST00000273077 THOC7Q6I9Y2 204 aaKnown RBP13.88□□□□□ -0.19
PNKD-203ENST00000273077 CHSY3Q70JA7 882 aa13.88□□□□□ -0.19
PNKD-203ENST00000273077 LARP4Q71RC2 724 aaKnown RBP eCLIP13.88□□□□□ -0.192e-6■■■■□ 24.6
PNKD-203ENST00000273077 BEND5Q7L4P6 421 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms